RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RNF41Q9H4P4 317 aaPredicted RBP21.69■■□□□ 1.06
CLN6-214ENST00000636314 EYSQ5T1H1 3165 aa21.69■■□□□ 1.06
CLN6-214ENST00000636314 TMEM232C9JQI7 657 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 ZNF213O14771 459 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 ADCYAP1R1P41586 468 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 CPXCR1Q8N123 301 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 BADQ92934 168 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 FERMT2Q96AC1 680 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 CHMP4CQ96CF2 233 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
CLN6-214ENST00000636314 MCCP23508 829 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 LRRC41Q15345 812 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 C9orf50Q5SZB4 431 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 FAM160B2Q86V87 743 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 SLC38A10Q9HBR0 1119 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 MTMR7Q9Y216 660 aa21.67■■□□□ 1.06
CLN6-214ENST00000636314 NEDD4P46934 1319 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 RAD50Q92878 1312 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 ATP2A1O14983 1001 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 NOVP48745 357 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 CHURC1Q8WUH1 139 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 MAML3Q96JK9 1138 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 RAVER2Q9HCJ3 691 aaKnown RBP21.66■■□□□ 1.06
CLN6-214ENST00000636314 PDLIM7Q9NR12 457 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 TCP11L1Q9NUJ3 509 aa21.66■■□□□ 1.06
CLN6-214ENST00000636314 PGK2P07205 417 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 FDX1P10109 184 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 TOP1P11387 765 aaKnown RBP21.65■■□□□ 1.06
CLN6-214ENST00000636314 OAZ1P54368 228 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 SNX17Q15036 470 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 CCDC96Q2M329 555 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 KCTD1Q719H9 257 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 SH3RF1Q7Z6J0 888 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 ESR2Q92731 530 aa21.65■■□□□ 1.06
CLN6-214ENST00000636314 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
CLN6-214ENST00000636314 RCSD1Q6JBY9 416 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 RASGRP2Q7LDG7 609 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 DCAF4Q8WV16 495 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 RUFY2Q8WXA3 655 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 CDX2Q99626 313 aaPredicted RBP21.64■■□□□ 1.05
CLN6-214ENST00000636314 IL25Q9H293 177 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 RIPK3Q9Y572 518 aa21.64■■□□□ 1.05
CLN6-214ENST00000636314 TRIM43BA6NCK2 446 aa21.63■■□□□ 1.05
CLN6-214ENST00000636314 NT5C2P49902 561 aa21.63■■□□□ 1.05
CLN6-214ENST00000636314 TRIM43Q96BQ3 446 aaPredicted RBP21.63■■□□□ 1.05
CLN6-214ENST00000636314 TMEM47Q9BQJ4 181 aa21.63■■□□□ 1.05
CLN6-214ENST00000636314 SEMA6BQ9H3T3 888 aa21.63■■□□□ 1.05
CLN6-214ENST00000636314 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
CLN6-214ENST00000636314 PLA2G6O60733 806 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 RARBP10826 455 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 TLE2Q04725 743 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 ZNF792Q3KQV3 632 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 DDX11Q96FC9 970 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 FBXO40Q9UH90 709 aa21.62■■□□□ 1.05
CLN6-214ENST00000636314 DIS3Q9Y2L1 958 aaKnown RBP21.62■■□□□ 1.05
CLN6-214ENST00000636314 CHST13Q8NET6 341 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 MAFAQ8NHW3 353 aaPredicted RBP21.61■■□□□ 1.05
CLN6-214ENST00000636314 MYLIPQ8WY64 445 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 TTC14Q96N46 770 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 HOMER2Q9NSB8 354 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 PRR12Q9ULL5 1215 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 PHF24Q9UPV7 400 aa21.61■■□□□ 1.05
CLN6-214ENST00000636314 PRUNE2Q8WUY3 3088 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 KDM4AO75164 1064 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 CHMLP26374 656 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 SMAD3P84022 425 aaKnown RBP21.6■■□□□ 1.05
CLN6-214ENST00000636314 C1orf53Q5VUE5 145 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 RNF180Q86T96 592 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 IQCA1Q86XH1 822 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 ZKSCAN3Q9BRR0 538 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 NRBP1Q9UHY1 535 aa21.6■■□□□ 1.05
CLN6-214ENST00000636314 FRMPD2Q68DX3 1309 aaPredicted RBP21.59■■□□□ 1.05
CLN6-214ENST00000636314 B4E1Z4 1266 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 PGK1P00558 417 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 CLTBP09497 229 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 CCDC174Q6PII3 467 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.59■■□□□ 1.05
CLN6-214ENST00000636314 ANKRD35Q8N283 1001 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 TINF2Q9BSI4 451 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 ACAD9Q9H845 621 aa21.59■■□□□ 1.05
CLN6-214ENST00000636314 ZNF536O15090 1300 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 PQBP1O60828 265 aaKnown RBP21.58■■□□□ 1.05
CLN6-214ENST00000636314 PDHBP11177 359 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 TAL1P17542 331 aaPredicted RBP21.58■■□□□ 1.05
CLN6-214ENST00000636314 CCDC178Q5BJE1 867 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.05
CLN6-214ENST00000636314 RNPC3Q96LT9 517 aaKnown RBP21.58■■□□□ 1.05
CLN6-214ENST00000636314 AGBL1Q96MI9 1066 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 KRT23Q9C075 422 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 TTYH1Q9H313 450 aaPredicted RBP21.58■■□□□ 1.05
CLN6-214ENST00000636314 CNNM2Q9H8M5 875 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 GPCPD1Q9NPB8 672 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 RNF146Q9NTX7 359 aa21.58■■□□□ 1.05
CLN6-214ENST00000636314 DNAJC25-GNG10A0A024R161 153 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 A0A1W2PQ45 241 aaPredicted RBP21.57■■□□□ 1.04
CLN6-214ENST00000636314 A0A1W2PQY0 241 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 FOSL2P15408 326 aa21.57■■□□□ 1.04
CLN6-214ENST00000636314 RAG1P15918 1043 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms