RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 RNF146Q9NTX7 359 aa21.47■■□□□ 1.03
CLN6-210ENST00000635747 COLQQ9Y215 455 aaPredicted RBP21.47■■□□□ 1.03
CLN6-210ENST00000635747 ZNF536O15090 1300 aa21.47■■□□□ 1.03
CLN6-210ENST00000635747 KBTBD13C9JR72 458 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 KDM4AO75164 1064 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 RARBP10826 455 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 PDHBP11177 359 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 ALAS1P13196 640 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 GPATCH4Q5T3I0 446 aaKnown RBP21.46■■□□□ 1.03
CLN6-210ENST00000635747 SYDE2Q5VT97 1194 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 CCDC174Q6PII3 467 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 TRERF1Q96PN7 1200 aa21.46■■□□□ 1.03
CLN6-210ENST00000635747 SENP6Q9GZR1 1112 aaPredicted RBP21.46■■□□□ 1.03
CLN6-210ENST00000635747 B4E1Z4 1266 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 SLC34A2O95436 690 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 ICAM1P05362 532 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 SNHG28P0DPA3 235 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 AKR1A1P14550 325 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 CHRDL2Q6WN34 429 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 C7orf61Q8IZ16 206 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 ANKS1AQ92625 1134 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 RANBP17Q9H2T7 1088 aaKnown RBP21.45■■□□□ 1.02
CLN6-210ENST00000635747 ZSWIM5Q9P217 1185 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 CCPG1Q9ULG6 757 aa21.45■■□□□ 1.02
CLN6-210ENST00000635747 POTEB2H3BUK9 544 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 ZNF865P0CJ78 1059 aaPredicted RBP21.44■■□□□ 1.02
CLN6-210ENST00000635747 ZNF543Q08ER8 600 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 ZSCAN10Q96SZ4 725 aaPredicted RBP21.44■■□□□ 1.02
CLN6-210ENST00000635747 ZKSCAN3Q9BRR0 538 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 KAT14Q9H8E8 782 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 GPCPD1Q9NPB8 672 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 FAM184BQ9ULE4 1060 aa21.44■■□□□ 1.02
CLN6-210ENST00000635747 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
CLN6-210ENST00000635747 SLC16A2P36021 539 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 TRDNQ13061 729 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 GJC2Q5T442 439 aaPredicted RBP21.43■■□□□ 1.02
CLN6-210ENST00000635747 ANO1Q5XXA6 986 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 TTBK2Q6IQ55 1244 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 RASGRP2Q7LDG7 609 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 RNF180Q86T96 592 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 PNMA1Q8ND90 353 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 UBAC1Q9BSL1 405 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 IL25Q9H293 177 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 ABHD16BQ9H3Z7 469 aa21.43■■□□□ 1.02
CLN6-210ENST00000635747 A1CFQ9NQ94 594 aaKnown RBP21.43■■□□□ 1.02
CLN6-210ENST00000635747 FRMPD2Q68DX3 1309 aaPredicted RBP21.43■■□□□ 1.02
CLN6-210ENST00000635747 SNAI1O95863 264 aaPredicted RBP21.42■■□□□ 1.02
CLN6-210ENST00000635747 TAL1P17542 331 aaPredicted RBP21.42■■□□□ 1.02
CLN6-210ENST00000635747 RANBP2P49792 3224 aaKnown RBP21.42■■□□□ 1.02
CLN6-210ENST00000635747 SNAP25P60880 206 aa21.42■■□□□ 1.02
CLN6-210ENST00000635747 LRRC41Q15345 812 aa21.42■■□□□ 1.02
CLN6-210ENST00000635747 LRRC26Q2I0M4 334 aa21.42■■□□□ 1.02
CLN6-210ENST00000635747 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
CLN6-210ENST00000635747 FAM133AQ8N9E0 248 aa21.42■■□□□ 1.02
CLN6-210ENST00000635747 XPNPEP3Q9NQH7 507 aa21.42■■□□□ 1.02
CLN6-210ENST00000635747 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
CLN6-210ENST00000635747 ASB14A6NK59 587 aa21.41■■□□□ 1.02
CLN6-210ENST00000635747 SGSM2O43147 1006 aa21.41■■□□□ 1.02
CLN6-210ENST00000635747 ACVR2BQ13705 512 aa21.41■■□□□ 1.02
CLN6-210ENST00000635747 PLXNA1Q9UIW2 1896 aa21.41■■□□□ 1.02
CLN6-210ENST00000635747 TNKSO95271 1327 aa21.4■■□□□ 1.02
CLN6-210ENST00000635747 A0A1W2PPC1 479 aa21.4■■□□□ 1.02
CLN6-210ENST00000635747 MYCNP04198 464 aaPredicted RBP21.4■■□□□ 1.02
CLN6-210ENST00000635747 ARMCX2Q7L311 632 aa21.4■■□□□ 1.02
CLN6-210ENST00000635747 ENAHQ8N8S7 591 aaPredicted RBP21.4■■□□□ 1.02
CLN6-210ENST00000635747 CYP39A1Q9NYL5 469 aa21.4■■□□□ 1.02
CLN6-210ENST00000635747 RBM27Q9P2N5 1060 aaKnown RBP21.4■■□□□ 1.02
CLN6-210ENST00000635747 ZHX1Q9UKY1 873 aaPredicted RBP21.4■■□□□ 1.02
CLN6-210ENST00000635747 LAMA4Q16363 1823 aa21.4■■□□□ 1.02
CLN6-210ENST00000635747 CNTN2Q02246 1040 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 PTH1RQ03431 593 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 ASPRV1Q53RT3 343 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 MUM1L1Q5H9M0 696 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 IFIT1BQ5T764 474 aaKnown RBP21.39■■□□□ 1.01
CLN6-210ENST00000635747 CCDC144CPQ8IYA2 1237 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 FGD4Q96M96 766 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 PRO3102Q9H379 93 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
CLN6-210ENST00000635747 FRMPD3Q5JV73 1810 aa21.39■■□□□ 1.01
CLN6-210ENST00000635747 WDR19Q8NEZ3 1342 aa21.38■■□□□ 1.01
CLN6-210ENST00000635747 DUSP11O75319 330 aaKnown RBP21.38■■□□□ 1.01
CLN6-210ENST00000635747 NSMFQ6X4W1 530 aa21.38■■□□□ 1.01
CLN6-210ENST00000635747 KIAA1211Q6ZU35 1233 aa21.38■■□□□ 1.01
CLN6-210ENST00000635747 TSEN34Q9BSV6 310 aaKnown RBP21.38■■□□□ 1.01
CLN6-210ENST00000635747 SPC25Q9HBM1 224 aa21.38■■□□□ 1.01
CLN6-210ENST00000635747 LOC102724159A0A0B4J2E5 919 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 SOWAHBA6NEL2 793 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 PGK1P00558 417 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 CYP21A2P08686 494 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 BMP8BP34820 402 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 ADCYAP1R1P41586 468 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 ATN1P54259 1190 aaPredicted RBP21.37■■□□□ 1.01
CLN6-210ENST00000635747 PWP2Q15269 919 aaKnown RBP21.37■■□□□ 1.01
CLN6-210ENST00000635747 SLC39A5Q6ZMH5 540 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 MAP4K1Q92918 833 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 MAF1Q9H063 256 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 ADD3Q9UEY8 706 aaKnown RBP21.37■■□□□ 1.01
CLN6-210ENST00000635747 PHF24Q9UPV7 400 aa21.37■■□□□ 1.01
CLN6-210ENST00000635747 ERICH2A1L162 156 aa21.36■■□□□ 1.01
CLN6-210ENST00000635747 PARP1P09874 1014 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms