RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 USP17L10C9JJH3 530 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 ADAMTS3O15072 1205 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 BMP3P12645 472 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 LMNB1P20700 586 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 CAP2P40123 477 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 JAG1P78504 1218 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 ZRSR1Q15695 479 aaKnown RBP13.26□□□□□ -0.29
TP53-228ENST00000635293 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 CNOT7Q9UIV1 285 aaKnown RBP13.26□□□□□ -0.29
TP53-228ENST00000635293 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 MYH7BA7E2Y1 1941 aa13.26□□□□□ -0.29
TP53-228ENST00000635293 ASNSP08243 561 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 MCM7P33993 719 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 PRPHP41219 470 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 GRIN1Q05586 938 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 RASA3Q14644 834 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
TP53-228ENST00000635293 INF2Q27J81 1249 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 CUL5Q93034 780 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 HOOK2Q96ED9 719 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
TP53-228ENST00000635293 SLC16A2P36021 539 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
TP53-228ENST00000635293 TRAF1Q13077 416 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 QRICH1Q2TAL8 776 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 NEK8Q86SG6 692 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
TP53-228ENST00000635293 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
TP53-228ENST00000635293 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
TP53-228ENST00000635293 A0A1W2PRG0 241 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 H7C1D1 291 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 RAD21O60216 631 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 MSNP26038 577 aaKnown RBP13.24□□□□□ -0.29
TP53-228ENST00000635293 ZNF165P49910 485 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 MRPL12P52815 198 aaKnown RBP13.24□□□□□ -0.29
TP53-228ENST00000635293 MCTP2Q6DN12 878 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 GPC2Q8N158 579 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 COA7Q96BR5 231 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 CBX8Q9HC52 389 aa13.24□□□□□ -0.29
TP53-228ENST00000635293 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 PLA2G6O60733 806 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 RBBP6Q7Z6E9 1792 aaKnown RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 ACTN4O43707 911 aaKnown RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 EGFRP00533 1210 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 TXLNAP40222 546 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 STAT2P52630 851 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 NLRP12P59046 1061 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 LONRF3Q496Y0 759 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 TBC1D10BQ4KMP7 808 aaPredicted RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 SPECC1Q5M775 1068 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 NAP1L4Q99733 375 aaKnown RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 BPIFA3Q9BQP9 254 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 AMNQ9BXJ7 453 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
TP53-228ENST00000635293 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 PPP2R3BQ9Y5P8 575 aa13.23□□□□□ -0.29
TP53-228ENST00000635293 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
TP53-228ENST00000635293 NEMFO60524 1076 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
TP53-228ENST00000635293 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
TP53-228ENST00000635293 MIGA2Q7L4E1 593 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 TBCKQ8TEA7 893 aa13.22□□□□□ -0.29
TP53-228ENST00000635293 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
TP53-228ENST00000635293 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 ECE1P42892 770 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 POSTNQ15063 836 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 DTHD1Q6ZMT9 781 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 FBXO11Q86XK2 927 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 ACER1Q8TDN7 264 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 AK8Q96MA6 479 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
TP53-228ENST00000635293 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
TP53-228ENST00000635293 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms