RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 DSG3P32926 999 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 ATG4CQ96DT6 458 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 PIGSQ96S52 555 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 ORC3Q9UBD5 711 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 TBC1D8O95759 1140 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 SKOR2Q2VWA4 1001 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-208ENST00000634934 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
LINC00339-208ENST00000634934 SPDYE16A6NNV3 312 aaPredicted RBP16.69■□□□□ 0.26
LINC00339-208ENST00000634934 ZBED4O75132 1171 aa16.69■□□□□ 0.26
LINC00339-208ENST00000634934 CYP2C8P10632 490 aa16.69■□□□□ 0.26
LINC00339-208ENST00000634934 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
LINC00339-208ENST00000634934 CCDC174Q6PII3 467 aa16.69■□□□□ 0.26
LINC00339-208ENST00000634934 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
LINC00339-208ENST00000634934 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 VWA5AO00534 786 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 ZBTB5O15062 677 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 HSPA8P11142 646 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 GJB2P29033 226 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 HERVK_113P62684 666 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 HMGN5P82970 282 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 GBP4Q96PP9 640 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 PARK7Q99497 189 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
LINC00339-208ENST00000634934 MYPNQ86TC9 1320 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 STK36Q9NRP7 1315 aa16.68■□□□□ 0.26
LINC00339-208ENST00000634934 DEXIO95424 95 aa16.67■□□□□ 0.26
LINC00339-208ENST00000634934 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
LINC00339-208ENST00000634934 LBX1P52954 281 aa16.67■□□□□ 0.26
LINC00339-208ENST00000634934 CPXCR1Q8N123 301 aa16.67■□□□□ 0.26
LINC00339-208ENST00000634934 MTMR8Q96EF0 704 aa16.67■□□□□ 0.26
LINC00339-208ENST00000634934 SLC38A10Q9HBR0 1119 aa16.67■□□□□ 0.26
LINC00339-208ENST00000634934 FDX1P10109 184 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 SCG2P13521 617 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 FOSBP53539 338 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
LINC00339-208ENST00000634934 PFKFB3Q16875 520 aaPredicted RBP16.66■□□□□ 0.26
LINC00339-208ENST00000634934 HEATR3Q7Z4Q2 680 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 WASF1Q92558 559 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
LINC00339-208ENST00000634934 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 ADAMTS5Q9UNA0 930 aa16.66■□□□□ 0.26
LINC00339-208ENST00000634934 CA12O43570 354 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 CTCFP49711 727 aaPredicted RBP16.65■□□□□ 0.26
LINC00339-208ENST00000634934 CRHR2Q13324 411 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 PLS1Q14651 629 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 PKN1Q16512 942 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 USH1GQ495M9 461 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 GPKOWQ92917 476 aaPredicted RBP eCLIP16.65■□□□□ 0.26
LINC00339-208ENST00000634934 AIFM3Q96NN9 605 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 ALG1Q9BT22 464 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 AMNQ9BXJ7 453 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 ZCCHC17Q9NP64 241 aaKnown RBP16.65■□□□□ 0.26
LINC00339-208ENST00000634934 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 TRAK2O60296 914 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 PEX10O60683 326 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 PPP1R11O60927 126 aaPredicted RBP16.65■□□□□ 0.26
LINC00339-208ENST00000634934 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 LBX2Q6XYB7 198 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
LINC00339-208ENST00000634934 COA7Q96BR5 231 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 AGBL1Q96MI9 1066 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 CCPG1Q9ULG6 757 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 CASP8AP2Q9UKL3 1982 aa16.65■□□□□ 0.26
LINC00339-208ENST00000634934 GOLGA6L3A6NEY3 463 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 ICAM1P05362 532 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.25
LINC00339-208ENST00000634934 MRE11P49959 708 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 WWC2Q6AWC2 1192 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 BTBD7Q9P203 1132 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 RBPJLQ9UBG7 517 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 ZNF536O15090 1300 aa16.64■□□□□ 0.25
LINC00339-208ENST00000634934 GCLCP48506 637 aaPredicted RBP16.63■□□□□ 0.25
LINC00339-208ENST00000634934 SNRNP48Q6IEG0 339 aaKnown RBP16.63■□□□□ 0.25
LINC00339-208ENST00000634934 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
LINC00339-208ENST00000634934 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
LINC00339-208ENST00000634934 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
LINC00339-208ENST00000634934 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms