RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 ATL2Q8NHH9 583 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 RRP36Q96EU6 259 aaKnown RBP8.13□□□□□ -1.11
BRCA1-230ENST00000634433 CCDC17Q96LX7 622 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 OSBPL5Q9H0X9 879 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-230ENST00000634433 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
BRCA1-230ENST00000634433 SERPINB13Q9UIV8 391 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 MYO1BO43795 1136 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 CDC42EP5Q6NZY7 148 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 C11orf57Q6ZUT1 292 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-230ENST00000634433 STAG2Q8N3U4 1231 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 EHD4Q9H223 541 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 BARHL2Q9NY43 387 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 MTMR4Q9NYA4 1195 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 SEC63Q9UGP8 760 aaKnown RBP8.13□□□□□ -1.11
BRCA1-230ENST00000634433 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 SH3BP1Q9Y3L3 701 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 MYH1P12882 1939 aa8.13□□□□□ -1.11
BRCA1-230ENST00000634433 IKBKBO14920 756 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 ECE2O60344 883 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 GNA11P29992 359 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SCNN1DP51172 638 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 DHX8Q14562 1220 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 NPY5RQ15761 445 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 ASPRV1Q53RT3 343 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SOGA3Q5TF21 947 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 ARL6IP4Q66PJ3 421 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 APOBEC3HQ6NTF7 200 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 MRFAP1L1Q96HT8 127 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 DBNDD1Q9H9R9 158 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 POLR2DO15514 142 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 AP5Z1O43299 807 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SMC2O95347 1197 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 TTLL1O95922 423 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 C7P10643 843 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 ATP2C1P98194 919 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 ZNF174Q15697 407 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 CT47A1Q5JQC4 288 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 DACT2Q5SW24 774 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 PIK3AP1Q6ZUJ8 805 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 DHX40Q8IX18 779 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 RTKN2Q8IZC4 609 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 TRIML1Q8N9V2 468 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 PIBF1Q8WXW3 757 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SHISA4Q96DD7 197 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 CSRNP2Q9H175 543 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 GOPCQ9HD26 462 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 C6orf50Q9HD87 102 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 USTQ9Y2C2 406 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SRCAPQ6ZRS2 3230 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
BRCA1-230ENST00000634433 BRCA1P38398 1863 aaKnown RBP8.12□□□□□ -1.11
BRCA1-230ENST00000634433 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 POSTNQ15063 836 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 HEATR3Q7Z4Q2 680 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 RPUSD2Q8IZ73 545 aaKnown RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 AOPEPQ8N6M6 819 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 IDI2Q9BXS1 227 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 UBA5Q9GZZ9 404 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 NRBP1Q9UHY1 535 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 CDK5RAP2Q96SN8 1893 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 COL11A2P13942 1736 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 IGKV6D-41A0A0C4DH26 115 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 STXBP3O00186 592 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 LAD1O00515 517 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 NEMFO60524 1076 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 LONP1P36776 959 aaKnown RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 TXLNAP40222 546 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 IGBP1P78318 339 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 MDM2Q00987 491 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 PTGDRQ13258 359 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 WWC2Q6AWC2 1192 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 FOXP4Q8IVH2 680 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 SMARCE1Q969G3 411 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 VPS33BQ9H267 617 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 DDX4Q9NQI0 724 aaKnown RBP8.11□□□□□ -1.11
BRCA1-230ENST00000634433 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 CLIP2Q9UDT6 1046 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 FOCADQ5VW36 1801 aa8.11□□□□□ -1.11
BRCA1-230ENST00000634433 BIN1O00499 593 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SLFN14P0C7P3 912 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 CHRNA5P30532 468 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 NAPAP54920 295 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 ORC2Q13416 577 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 PNOCQ13519 176 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 DPCR1Q3MIW9 517 aa8.1□□□□□ -1.11
BRCA1-230ENST00000634433 EARS2Q5JPH6 523 aaKnown RBP8.1□□□□□ -1.11
BRCA1-230ENST00000634433 SPECC1Q5M775 1068 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms