RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 PLXNB2O15031 1838 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 KIF5BP33176 963 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 COPB2P35606 906 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 RCAN1P53805 252 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 PRMT2P55345 433 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 PKN2Q16513 984 aaKnown RBP22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 SYNE3Q6ZMZ3 975 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 MICU3Q86XE3 530 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 RAB11FIP4Q86YS3 637 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 CCAR1Q8IX12 1150 aaKnown RBP22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 MTMR8Q96EF0 704 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 AGBL1Q96MI9 1066 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 ALDH8A1Q9H2A2 487 aaPredicted RBP22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 RIOX1Q9H6W3 641 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 PDRG1Q9NUG6 133 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 GABRQQ9UN88 632 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 PTPN22Q9Y2R2 807 aa22.59■■□□□ 1.21
CROCCP4-202ENST00000633627 ZBTB43O43298 467 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 CYTH3O43739 400 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 ICAM1P05362 532 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 PTPREP23469 700 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 PRKCZQ05513 592 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 MORN1Q5T089 497 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 CCDC174Q6PII3 467 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 NCAPG2Q86XI2 1143 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 USP6NLQ92738 828 aa22.58■■□□□ 1.21
CROCCP4-202ENST00000633627 HTTP42858 3142 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 SMARCA1P28370 1054 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 FLT3LGP49771 235 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 GNAQP50148 359 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 CCDC144CPQ8IYA2 1237 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 UPF2Q9HAU5 1272 aaKnown RBP22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 VAT1LQ9HCJ6 419 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 FAM217BQ9NTX9 383 aaPredicted RBP22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 HPS5Q9UPZ3 1129 aa22.57■■□□□ 1.2
CROCCP4-202ENST00000633627 SLC15A5A6NIM6 579 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 STRNO43815 780 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 PLEKHA8P1O95397 391 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 GRB14Q14449 540 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 CDC37Q16543 378 aaPredicted RBP22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 TKFCQ3LXA3 575 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 WDR78Q5VTH9 848 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 FBXO46Q6PJ61 603 aaPredicted RBP22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 ABRAQ8N0Z2 381 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 SRBD1Q8N5C6 995 aaKnown RBP22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 LZTS2Q9BRK4 669 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 SPZ1Q9BXG8 430 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 MCOLN1Q9GZU1 580 aa22.56■■□□□ 1.2
CROCCP4-202ENST00000633627 ZNFX1Q9P2E3 1918 aaKnown RBP22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 NID2Q14112 1375 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 IRF5Q13568 498 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 QRICH1Q2TAL8 776 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 TMTC3Q6ZXV5 915 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 CHST13Q8NET6 341 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 SOCS4Q8WXH5 440 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 NUDT12Q9BQG2 462 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 PNMA2Q9UL42 364 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 CCPG1Q9ULG6 757 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 PTCH2Q9Y6C5 1203 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 IVNS1ABPQ9Y6Y0 642 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 MYH6P13533 1939 aa22.55■■□□□ 1.2
CROCCP4-202ENST00000633627 GOLGA8AA7E2F4 631 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 GOLGA8BA8MQT2 603 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 DHX16O60231 1041 aaKnown RBP22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 TAL1P17542 331 aaPredicted RBP22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 PDIA3P30101 505 aaKnown RBP22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 CDC27P30260 824 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 SLC4A3P48751 1232 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 NEK4P51957 841 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 PPP2R5BQ15173 497 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 RTN1Q16799 776 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 TBC1D32Q96NH3 1257 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 RNF146Q9NTX7 359 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 RBM28Q9NW13 759 aaKnown RBP22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 FBXO40Q9UH90 709 aa22.54■■□□□ 1.2
CROCCP4-202ENST00000633627 ZNF236Q9UL36 1845 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 ZBTB5O15062 677 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 FCER1AP12319 257 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 ALAS1P13196 640 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 FUT2Q10981 343 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 MAP2K5Q13163 448 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 CMTR1Q8N1G2 835 aaKnown RBP22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 ZNF274Q96GC6 653 aaPredicted RBP22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 TRERF1Q96PN7 1200 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 PIGSQ96S52 555 aa22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 LARP6Q9BRS8 491 aaKnown RBP22.53■■□□□ 1.2
CROCCP4-202ENST00000633627 HOXC6P09630 235 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 XRCC5P13010 732 aaKnown RBP22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 ADORA2AP29274 412 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 METAP2P50579 478 aaKnown RBP eCLIP22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 AK2P54819 239 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 MUM1L1Q5H9M0 696 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 MMP19Q99542 508 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 ACAD9Q9H845 621 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 HOMER2Q9NSB8 354 aa22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
CROCCP4-202ENST00000633627 PPP1R11O60927 126 aaPredicted RBP22.51■■□□□ 1.19
CROCCP4-202ENST00000633627 COBLO75128 1261 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms