RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 DEFB123Q8N688 67 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 AGBL1Q96MI9 1066 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
PDCD6-214ENST00000628729 KATNBL1Q9H079 304 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 PRDM5Q9NQX1 630 aaPredicted RBP19.65■□□□□ 0.74
PDCD6-214ENST00000628729 STX8Q9UNK0 236 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 CNPY2Q9Y2B0 182 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 DDX49Q9Y6V7 483 aaKnown RBP19.65■□□□□ 0.74
PDCD6-214ENST00000628729 ASTN1O14525 1302 aa19.65■□□□□ 0.74
PDCD6-214ENST00000628729 A0A0C4DFX4 3053 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 ORC4O43929 436 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 FGRP09769 529 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 SLC1A4P43007 532 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 CNTN2Q02246 1040 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 TLE2Q04725 743 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 NMIQ13287 307 aaPredicted RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 ALX1Q15699 326 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 C9orf50Q5SZB4 431 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 CCSAPQ6IQ19 270 aaPredicted RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 RNF180Q86T96 592 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 SMC5Q8IY18 1101 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 CHST13Q8NET6 341 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 LBHD1Q9BQE6 289 aaPredicted RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 HELLSQ9NRZ9 838 aa19.64■□□□□ 0.73
PDCD6-214ENST00000628729 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 ZHX1Q9UKY1 873 aaPredicted RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
PDCD6-214ENST00000628729 FGAP02671 866 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 ARMCX2Q7L311 632 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 ANKRD35Q8N283 1001 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 FAM133AQ8N9E0 248 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 KLHDC9Q8NEP7 349 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 STAG1Q8WVM7 1258 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 BADQ92934 168 aa19.63■□□□□ 0.73
PDCD6-214ENST00000628729 A1CFQ9NQ94 594 aaKnown RBP19.63■□□□□ 0.73
PDCD6-214ENST00000628729 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
PDCD6-214ENST00000628729 ZMYM6O95789 1325 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
PDCD6-214ENST00000628729 PLA2G6O60733 806 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 ACVR2BQ13705 512 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 CCDC144CPQ8IYA2 1237 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 ACAD9Q9H845 621 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 RNF146Q9NTX7 359 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 MTMR10Q9NXD2 777 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 PRKAG2Q9UGJ0 569 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 FBXO40Q9UH90 709 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 PRR12Q9ULL5 1215 aa19.62■□□□□ 0.73
PDCD6-214ENST00000628729 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 CTAGE5O15320 804 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 IGHDP01880 384 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 HSPD1P10809 573 aaKnown RBP19.61■□□□□ 0.73
PDCD6-214ENST00000628729 PTGS1P23219 599 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 ACLYP53396 1101 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 IKQ13123 557 aaPredicted RBP19.61■□□□□ 0.73
PDCD6-214ENST00000628729 SHHQ15465 462 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 CCDC144BQ3MJ40 725 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 MCMDC2Q4G0Z9 681 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 MUM1L1Q5H9M0 696 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 TBC1D10CQ8IV04 446 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
PDCD6-214ENST00000628729 FAM184BQ9ULE4 1060 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 MTMR7Q9Y216 660 aa19.61■□□□□ 0.73
PDCD6-214ENST00000628729 CCDC171Q6TFL3 1326 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.6■□□□□ 0.73
PDCD6-214ENST00000628729 PQBP1O60828 265 aaKnown RBP19.6■□□□□ 0.73
PDCD6-214ENST00000628729 DUSP11O75319 330 aaKnown RBP19.6■□□□□ 0.73
PDCD6-214ENST00000628729 FDX1P10109 184 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 HAND2P61296 217 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 TTBK2Q6IQ55 1244 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 RCSD1Q6JBY9 416 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 CCDC174Q6PII3 467 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 CHURC1Q8WUH1 139 aa19.6■□□□□ 0.73
PDCD6-214ENST00000628729 UPF3AQ9H1J1 476 aaKnown RBP19.6■□□□□ 0.73
PDCD6-214ENST00000628729 CLTBP09497 229 aa19.59■□□□□ 0.73
PDCD6-214ENST00000628729 CST5P28325 142 aaPredicted RBP19.59■□□□□ 0.73
PDCD6-214ENST00000628729 EPHB4P54760 987 aa19.59■□□□□ 0.73
PDCD6-214ENST00000628729 KCNA10Q16322 511 aa19.59■□□□□ 0.73
PDCD6-214ENST00000628729 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
PDCD6-214ENST00000628729 TSEN34Q9BSV6 310 aaKnown RBP19.59■□□□□ 0.73
PDCD6-214ENST00000628729 ABHD16BQ9H3Z7 469 aa19.59■□□□□ 0.73
PDCD6-214ENST00000628729 POTEB2H3BUK9 544 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 ALAS1P13196 640 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 SLC16A2P36021 539 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 FAAP100Q0VG06 881 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 CCDC96Q2M329 555 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 RRP12Q5JTH9 1297 aaKnown RBP19.58■□□□□ 0.72
PDCD6-214ENST00000628729 PPP4R3BQ5MIZ7 849 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 ANKRD33Q7Z3H0 272 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 PLEKHM2Q8IWE5 1019 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 GUCD1Q96NT3 240 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 TRERF1Q96PN7 1200 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
PDCD6-214ENST00000628729 TMEM47Q9BQJ4 181 aa19.58■□□□□ 0.72
PDCD6-214ENST00000628729 RANBP17Q9H2T7 1088 aaKnown RBP19.58■□□□□ 0.72
PDCD6-214ENST00000628729 NEDD4P46934 1319 aa19.57■□□□□ 0.72
PDCD6-214ENST00000628729 FRMPD2Q68DX3 1309 aaPredicted RBP19.57■□□□□ 0.72
PDCD6-214ENST00000628729 MOXD2PA6NHM9 499 aa19.57■□□□□ 0.72
PDCD6-214ENST00000628729 TRIM6-TRIM34B2RNG4 842 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms