RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SCG2P13521 617 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 KRT2P35908 639 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 GTF2A2P52657 109 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 DEFB115Q30KQ5 88 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 CDK5RAP3Q96JB5 506 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 TNMDQ9H2S6 317 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 FEM1BQ9UK73 627 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 TPM3P06753 285 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 PTPRAP18433 802 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 KCTD2Q14681 263 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 FTOQ9C0B1 505 aaKnown RBP eCLIP14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 GINM1Q9NU53 330 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 FBXO28Q9NVF7 368 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 DACT1Q9NYF0 836 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 IRF6O14896 467 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 WDR46O15213 610 aaKnown RBP14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 COG2Q14746 738 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 MTA3Q9BTC8 594 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 COL11A2P13942 1736 aaPredicted RBP14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 USP2O75604 605 aaPredicted RBP14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 PSTPIP2Q9H939 334 aa14.18□□□□□ -0.14
SYNGAP1-207ENST00000628646 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 RGMBQ6NW40 437 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 DPP9Q86TI2 863 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 CLSTN2Q9H4D0 955 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 BAZ2BQ9UIF8 2168 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SRCAPQ6ZRS2 3230 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SNW1Q13573 536 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 MAP3K11Q16584 847 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 PKD2L1Q9P0L9 805 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 RCOR1Q9UKL0 485 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 WDR19Q8NEZ3 1342 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 TBC1D12O60347 775 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SREBF2Q12772 1141 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 KRT40Q6A162 431 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SNRNP48Q6IEG0 339 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 SGMS1Q86VZ5 419 aa14.17□□□□□ -0.14
SYNGAP1-207ENST00000628646 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 PDHBP11177 359 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 TERF1P54274 439 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 FKBP1BP68106 108 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 SP4Q02446 784 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 GRM4Q14833 912 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 ZNF784Q8NCA9 323 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 GOLPH3LQ9H4A5 285 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 SAMM50Q9Y512 469 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 TXLNAP40222 546 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 PPATQ06203 517 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 TYRO3Q06418 890 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 UIMC1Q96RL1 719 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 IL17RBQ9NRM6 502 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 MYH2Q9UKX2 1941 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 MYH13Q9UKX3 1938 aa14.16□□□□□ -0.14
SYNGAP1-207ENST00000628646 CTAGE5O15320 804 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 IFNAR1P17181 557 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 CAMK4Q16566 473 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 LETM2Q2VYF4 491 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 RNF26Q9BY78 433 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 CDC27P30260 824 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 ADGRF4Q8IZF3 695 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 CYP4F22Q6NT55 531 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 VCAM1P19320 739 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 ATG4CQ96DT6 458 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 PARK7Q99497 189 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 GLT8D2Q9H1C3 349 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 TCP11L1Q9NUJ3 509 aa14.15□□□□□ -0.14
SYNGAP1-207ENST00000628646 CXCL11O14625 94 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 STAT3P40763 770 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 USP28Q96RU2 1077 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 PNMA2Q9UL42 364 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 PNMA6FA0A0J9YX94 578 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 GABPAQ06546 454 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 QRICH1Q2TAL8 776 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 RASGRP2Q7LDG7 609 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 MCF2L2Q86YR7 1114 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 ZFYVE28Q9HCC9 887 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 SLC5A4Q9NY91 659 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 TATDN1Q6P1N9 297 aa14.14□□□□□ -0.15
SYNGAP1-207ENST00000628646 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms