RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ENTPD3O75355 529 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 FMR1Q06787 632 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 DPYDQ12882 1025 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 NOLC1Q14978 699 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 DTHD1Q6ZMT9 781 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 REXO1Q8N1G1 1221 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 KIAA1524Q8TCG1 905 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 SLC16A10Q8TF71 515 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 ATRNL1Q5VV63 1379 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 CCNT1O60563 726 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 RRP1BQ14684 758 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 GRIPAP1Q4V328 841 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 GPATCH4Q5T3I0 446 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 PDXDC2PQ6P474 469 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 TRIML1Q8N9V2 468 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 IQUBQ8NA54 791 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 GMLQ99445 158 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 KANSL2Q9H9L4 492 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 FANCLQ9NW38 375 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 NYAP2Q9P242 653 aa22.29■■□□□ 1.16
CHRNA4-209ENST00000627000 PNMA6FA0A0J9YX94 578 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 TCP10L2B9ZVM9 353 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 hCG_1984214I3L0E3 225 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 VIL1P09327 827 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 FANCCQ00597 558 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 KARSQ15046 597 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 NEK8Q86SG6 692 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 ZNF713Q8N859 430 aaPredicted RBP22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 MLKLQ8NB16 471 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 MKL1Q969V6 931 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 MTRQ99707 1265 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 KIF13BQ9NQT8 1826 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 SPDYE2BA6NHP3 402 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 ZBTB7AO95365 584 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 SPDYE6P0CI01 402 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 ADCY7P51828 1080 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 GLIPR1L2Q4G1C9 344 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 TRMT44Q8IYL2 757 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 CCDC34Q96HJ3 373 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 MED15Q96RN5 788 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
CHRNA4-209ENST00000627000 ICA1Q05084 483 aa22.27■■□□□ 1.16
CHRNA4-209ENST00000627000 ABCB5Q2M3G0 1257 aa22.27■■□□□ 1.16
CHRNA4-209ENST00000627000 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.27■■□□□ 1.16
CHRNA4-209ENST00000627000 NAP1L5Q96NT1 182 aaPredicted RBP22.27■■□□□ 1.16
CHRNA4-209ENST00000627000 CSRNP1Q96S65 589 aa22.27■■□□□ 1.16
CHRNA4-209ENST00000627000 PPP4R3BQ5MIZ7 849 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 TMEM179Q6ZVK1 233 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 DPF2Q92785 391 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 HSP90AA4PQ58FG1 418 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 MTMR8Q96EF0 704 aa22.26■■□□□ 1.15
CHRNA4-209ENST00000627000 ZBTB5O15062 677 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 EDIL3O43854 480 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 SLC1A4P43007 532 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 UBE2SQ16763 222 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 LAD1O00515 517 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 NEMFO60524 1076 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 GH2P01242 217 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 OR52Z1P0C646 297 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 CD44P16070 742 aaKnown RBP22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 TXLNAP40222 546 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 PRPHP41219 470 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 CUL4BQ13620 913 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 DLGAP5Q15398 846 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 LRRC8AQ8IWT6 810 aa22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 SMYD4Q8IYR2 804 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 ZNF70Q9UC06 446 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 ATF5Q9Y2D1 282 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-209ENST00000627000 ARFGEF1Q9Y6D6 1849 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 GSDMAQ96QA5 445 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 PLIN2Q99541 437 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 DISC1Q9NRI5 854 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 SPTLC3Q9NUV7 552 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 TMOD2Q9NZR1 351 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 DACH1Q9UI36 760 aa22.24■■□□□ 1.15
CHRNA4-209ENST00000627000 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 STAT6P42226 847 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 NAALADL2Q58DX5 795 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 TMC6Q7Z403 805 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 DCAF4Q8WV16 495 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 NUP88Q99567 741 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 PYM1Q9BRP8 204 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 RIC8AQ9NPQ8 531 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 NFE2L3Q9Y4A8 694 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 SERPINC1P01008 464 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 ENOX1Q8TC92 643 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 FBXO41Q8TF61 875 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 HDAC9Q9UKV0 1011 aa22.23■■□□□ 1.15
CHRNA4-209ENST00000627000 F5H6K3 240 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 UBA7P41226 1012 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 UBASH3AP57075 661 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 KLRC3Q07444 240 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 QRICH1Q2TAL8 776 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 RBM26Q5T8P6 1007 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 PPP1R18Q6NYC8 613 aa22.22■■□□□ 1.15
CHRNA4-209ENST00000627000 NIM1KQ8IY84 436 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms