RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 PPFIA1Q13136 1202 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
UBE3A-209ENST00000625778 IL17AQ16552 155 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 MCTP2Q6DN12 878 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
UBE3A-209ENST00000625778 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.071e-10■□□□□ 11.3
UBE3A-209ENST00000625778 TUBGCP2Q9BSJ2 902 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 PHF20Q9BVI0 1012 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 RNF26Q9BY78 433 aaPredicted RBP15.49■□□□□ 0.07
UBE3A-209ENST00000625778 RNF41Q9H4P4 317 aaPredicted RBP15.49■□□□□ 0.07
UBE3A-209ENST00000625778 FAM184BQ9ULE4 1060 aa15.49■□□□□ 0.07
UBE3A-209ENST00000625778 LGALS16A8MUM7 142 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 AKR1B10O60218 316 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 HSF2BPO75031 334 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 SCP2P22307 547 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 MMP14P50281 582 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 APBA1Q02410 837 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 TMTC2Q8N394 836 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 STAG1Q8WVM7 1258 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.079e-7■■■■□ 22.9
UBE3A-209ENST00000625778 ZC3H4Q9UPT8 1303 aaKnown RBP15.48■□□□□ 0.07
UBE3A-209ENST00000625778 C4AP0C0L4 1744 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.072e-13■■□□□ 11.6
UBE3A-209ENST00000625778 ATP2C2O75185 946 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 HNRNPH1P31943 449 aaKnown RBP15.48■□□□□ 0.07
UBE3A-209ENST00000625778 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 EHBP1Q8NDI1 1231 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 MS4A14Q96JA4 679 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 MST1RQ04912 1400 aa15.48■□□□□ 0.07
UBE3A-209ENST00000625778 FAM170AA1A519 330 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 ZSCAN5CA6NGD5 496 aaPredicted RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 PSMA7O14818 248 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 CSF1RP07333 972 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 HPDP32754 393 aaPredicted RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 IQCEQ6IPM2 695 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 PDXDC2PQ6P474 469 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 LPIN2Q92539 896 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 NOC4LQ9BVI4 516 aaKnown RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 IFIH1Q9BYX4 1025 aaKnown RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 RMND1Q9NWS8 449 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 MAP3K15Q6ZN16 1313 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 H7C1D1 291 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 SSBP05455 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 UBA7P41226 1012 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 GUCY1A3Q02108 690 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 PAPD7Q5XG87 772 aaKnown RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 JPH2Q9BR39 696 aaPredicted RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 ARHGAP23Q9P227 1491 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.073e-9■■□□□ 12.9
UBE3A-209ENST00000625778 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
UBE3A-209ENST00000625778 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 EXOC1Q9NV70 894 aa15.47■□□□□ 0.07
UBE3A-209ENST00000625778 ABCC12Q96J65 1359 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 TACC1O75410 805 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 ATP2C1P98194 919 aaPredicted RBP15.46■□□□□ 0.07
UBE3A-209ENST00000625778 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 IQCA1Q86XH1 822 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 KIRREL3Q8IZU9 778 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 MSL3Q8N5Y2 521 aaKnown RBP15.46■□□□□ 0.07
UBE3A-209ENST00000625778 TMOD3Q9NYL9 352 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 CAPN11Q9UMQ6 739 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 LRRC10BA6NIK2 292 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 C8orf74Q6P047 294 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 SPATA4Q8NEY3 305 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
UBE3A-209ENST00000625778 JAG2Q9Y219 1238 aa15.46■□□□□ 0.07
UBE3A-209ENST00000625778 NUTM2BA6NNL0 878 aaPredicted RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 NUTM2EB1AL46 878 aaPredicted RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 ALX1Q15699 326 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 CNOT6LQ96LI5 555 aaKnown RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 BACH1O14867 736 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 USO1O60763 962 aaKnown RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 BMP15O95972 392 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 FECHP22830 423 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 ASIC1P78348 528 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 SETQ01105 290 aaPredicted RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 TDRD12Q587J7 1177 aaKnown RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 TTMPQ5BVD1 217 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 MAATS1Q7Z4T9 603 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 SRBD1Q8N5C6 995 aaKnown RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 DNAJC7Q99615 494 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 NFU1Q9UMS0 254 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 TARSL2A2RTX5 802 aaKnown RBP15.45■□□□□ 0.06
UBE3A-209ENST00000625778 OPA1O60313 960 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 PAFAH1B1P43034 410 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 SEC24CP53992 1094 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 ARID5AQ03989 594 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 NNTQ13423 1086 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 ADSSL1Q8N142 457 aa15.45■□□□□ 0.06
UBE3A-209ENST00000625778 PROCA1Q8NCQ7 364 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms