RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 APPBP2Q92624 585 aa13.21□□□□□ -0.29
DDX41-218ENST00000625286 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
DDX41-218ENST00000625286 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
DDX41-218ENST00000625286 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
DDX41-218ENST00000625286 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.2□□□□□ -0.3
DDX41-218ENST00000625286 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
DDX41-218ENST00000625286 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.2□□□□□ -0.3
DDX41-218ENST00000625286 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 DCDC2CA8MYV0 355 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 FOXP2O15409 715 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 ZBED4O75132 1171 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 FOSL2P15408 326 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 DNAJB2P25686 324 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 PBX2P40425 430 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 GJA9P57773 515 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 TMEM240Q5SV17 173 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 TMEM63BQ5T3F8 832 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
DDX41-218ENST00000625286 AGBL1Q96MI9 1066 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
DDX41-218ENST00000625286 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 ELP1O95163 1332 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
DDX41-218ENST00000625286 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
DDX41-218ENST00000625286 CSF2RAP15509 400 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 NKX3-2P78367 333 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 BEX3Q00994 111 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
DDX41-218ENST00000625286 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
DDX41-218ENST00000625286 LCTP09848 1927 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 ARVCFO00192 962 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 TTLL1O95922 423 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 CD4P01730 458 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 ACRP10323 421 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 SNAP25P60880 206 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 GNASQ5JWF2 1037 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 PURBQ96QR8 312 aaKnown RBP13.18□□□□□ -0.3
DDX41-218ENST00000625286 PBX4Q9BYU1 374 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 ZNF576Q9H609 170 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
DDX41-218ENST00000625286 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
DDX41-218ENST00000625286 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
DDX41-218ENST00000625286 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 NMT2O60551 498 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 APPP05067 770 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 BMP3P12645 472 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 MCCP23508 829 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 CYP2C18P33260 490 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 TDO2P48775 406 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 OAZ1P54368 228 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 TFAP4Q01664 338 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 ZNF365Q70YC5 407 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 CXXC1Q9P0U4 656 aaPredicted RBP13.17□□□□□ -0.3
DDX41-218ENST00000625286 SYNPO2Q9UMS6 1093 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
DDX41-218ENST00000625286 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
DDX41-218ENST00000625286 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
DDX41-218ENST00000625286 SMPD1P17405 629 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 GNAT2P19087 354 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
DDX41-218ENST00000625286 VTI1AQ96AJ9 217 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
DDX41-218ENST00000625286 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX41-218ENST00000625286 PCDHB15Q9Y5E8 787 aa13.16□□□□□ -0.3
DDX41-218ENST00000625286 NCOR1O75376 2440 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 GBF1Q92538 1859 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
DDX41-218ENST00000625286 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms