RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 CWF19L1Q69YN2 538 aaKnown RBP8.22□□□□□ -1.09
CDKL5-204ENST00000623364 SLC43A3Q8NBI5 491 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-204ENST00000623364 BORCS6Q96GS4 357 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 MYD88Q99836 296 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 TSPYL4Q9UJ04 414 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 FAM184BQ9ULE4 1060 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 TIMELESSQ9UNS1 1208 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
CDKL5-204ENST00000623364 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.1
CDKL5-204ENST00000623364 ZNF865P0CJ78 1059 aaPredicted RBP8.21□□□□□ -1.1
CDKL5-204ENST00000623364 TAL1P17542 331 aaPredicted RBP8.21□□□□□ -1.1
CDKL5-204ENST00000623364 ATF7P17544 494 aaPredicted RBP8.21□□□□□ -1.1
CDKL5-204ENST00000623364 RGS3P49796 1198 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 ADAM15Q13444 863 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 VPS37DQ86XT2 251 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 SIL1Q9H173 461 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 KNSTRNQ9Y448 316 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 ADAMTS20P59510 1910 aa8.21□□□□□ -1.1
CDKL5-204ENST00000623364 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 MYO10Q9HD67 2058 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 LINC01565O15544 149 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 PLIN1O60240 522 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 TBC1D12O60347 775 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 CABYRO75952 493 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 SUPT20HL2P0C7V6 817 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 SP9P0CG40 484 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 CAP2P40123 477 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 ABRAQ8N0Z2 381 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 ZNF579Q8NAF0 562 aaKnown RBP8.2□□□□□ -1.1
CDKL5-204ENST00000623364 FAM84BQ96KN1 310 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-204ENST00000623364 TINF2Q9BSI4 451 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
CDKL5-204ENST00000623364 HYPKQ9NX55 129 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 BTBD7Q9P203 1132 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 INSL6Q9Y581 213 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 PTPRSQ13332 1948 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 CLSPNQ9HAW4 1339 aa8.2□□□□□ -1.1
CDKL5-204ENST00000623364 DDTLA6NHG4 134 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 SPTLC1O15269 473 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 PLA2G2AP14555 144 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 DEFB103AP81534 67 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 PPP2R3CQ969Q6 453 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 SRPK3Q9UPE1 567 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-204ENST00000623364 ATAD5Q96QE3 1844 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 C2CD3Q4AC94 2353 aa8.19□□□□□ -1.1
CDKL5-204ENST00000623364 TGM1P22735 817 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 GTF2F1P35269 517 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDKL5-204ENST00000623364 IRX5P78411 483 aaPredicted RBP8.18□□□□□ -1.1
CDKL5-204ENST00000623364 IL31Q6EBC2 164 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 CDCA7LQ96GN5 454 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 BBC3Q96PG8 261 aaPredicted RBP8.18□□□□□ -1.1
CDKL5-204ENST00000623364 IDI2Q9BXS1 227 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 MOV10L1Q9BXT6 1211 aaKnown RBP8.18□□□□□ -1.1
CDKL5-204ENST00000623364 CFAP46Q8IYW2 2715 aa8.18□□□□□ -1.1
CDKL5-204ENST00000623364 TET1Q8NFU7 2136 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 ANKRD18BA2A2Z9 1011 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 CYP2C9P11712 490 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 FCER1AP12319 257 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 ERCC3P19447 782 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 GJA9P57773 515 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 USP17L2Q6R6M4 530 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 ZNF605Q86T29 641 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 TMEM192Q8IY95 271 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 RUNDC1Q96C34 613 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 LMAN2LQ9H0V9 348 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 UPF3AQ9H1J1 476 aaKnown RBP8.17□□□□□ -1.1
CDKL5-204ENST00000623364 MROH8Q9H579 483 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 CLEC1BQ9P126 229 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 GMEB2Q9UKD1 530 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 NR2E1Q9Y466 385 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 RAI2Q9Y5P3 530 aa8.17□□□□□ -1.1
CDKL5-204ENST00000623364 DMXL2Q8TDJ6 3036 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 ASNSP08243 561 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 NPR3P17342 541 aa8.16□□□□□ -1.1
CDKL5-204ENST00000623364 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms