RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ZBED4O75132 1171 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 ASGR1P07306 291 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 ANKRD35Q8N283 1001 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 SLC38A10Q9HBR0 1119 aa13.08□□□□□ -0.32
LINC00963-214ENST00000622680 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.32
LINC00963-214ENST00000622680 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
LINC00963-214ENST00000622680 TIMP1P01033 207 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 APPP05067 770 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 PTGS1P23219 599 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 CST5P28325 142 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-214ENST00000622680 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 ACVR2BQ13705 512 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.323e-6■■■□□ 16.7
LINC00963-214ENST00000622680 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
LINC00963-214ENST00000622680 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 TOX2Q96NM4 488 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 UPF3AQ9H1J1 476 aaKnown RBP13.07□□□□□ -0.32
LINC00963-214ENST00000622680 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 DOCK5Q9H7D0 1870 aa13.07□□□□□ -0.32
LINC00963-214ENST00000622680 TMEM265A0A087WTH1 108 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-214ENST00000622680 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 CSF2RAP15509 400 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 PBX2P40425 430 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 BEX3Q00994 111 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
LINC00963-214ENST00000622680 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 ABHD16BQ9H3Z7 469 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
LINC00963-214ENST00000622680 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 ASTN1O14525 1302 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
LINC00963-214ENST00000622680 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-214ENST00000622680 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-214ENST00000622680 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
LINC00963-214ENST00000622680 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 CTAGE5O15320 804 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 TTLL1O95922 423 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 ACRP10323 421 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 CDK7P50613 346 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 GJA9P57773 515 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 GNASQ5JWF2 1037 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 MFSD5Q6N075 450 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 FAM126BQ8IXS8 530 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 PCSK9Q8NBP7 692 aaKnown RBP13.05□□□□□ -0.32
LINC00963-214ENST00000622680 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 TIFAQ96CG3 184 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 GPATCH3Q96I76 525 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 ZNF576Q9H609 170 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
LINC00963-214ENST00000622680 PRDM6Q9NQX0 595 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 ELP1O95163 1332 aa13.05□□□□□ -0.32
LINC00963-214ENST00000622680 ARVCFO00192 962 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 BMP3P12645 472 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 CYP2C18P33260 490 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 OAZ1P54368 228 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 SNAP25P60880 206 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 IKQ13123 557 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-214ENST00000622680 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00963-214ENST00000622680 IFNL3Q8IZI9 196 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 OTUD7AQ8TE49 926 aaPredicted RBP13.04□□□□□ -0.32
LINC00963-214ENST00000622680 MKL1Q969V6 931 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 ZNF536O15090 1300 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 UMODL1Q5DID0 1318 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 SIP14410 1827 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 NLRC5Q86WI3 1866 aa13.04□□□□□ -0.32
LINC00963-214ENST00000622680 SOWAHBA6NEL2 793 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 NMT2O60551 498 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
LINC00963-214ENST00000622680 ALAS1P13196 640 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 GNAT2P19087 354 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 STAT2P52630 851 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms