RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	NECAB2	Q7Z6G3	386 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	RIOX2	Q8IUF8	465 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	ANKRD35	Q8N283	1001 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	GTF3C2	Q8WUA4	911 aa	Predicted RBP	5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	DDX11	Q96FC9	970 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	MYL10	Q9BUA6	226 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	HTATIP2	Q9BUP3	242 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	TEX13B	Q9BXU2	312 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	LRRC2	Q9BYS8	371 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	CRISPLD2	Q9H0B8	497 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	VAT1L	Q9HCJ6	419 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	HOXC10	Q9NYD6	342 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	DDX20	Q9UHI6	824 aa	Known RBP	5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	CCPG1	Q9ULG6	757 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	PRR12	Q9ULL5	1215 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	TET1	Q8NFU7	2136 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	LOXHD1	Q8IVV2	1947 aa		5.27	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF536	O15090	1300 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	PTPDC1	A2A3K4	754 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	PQBP1	O60828	265 aa	Known RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	XRCC5	P13010	732 aa	Known RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	RXRA	P19793	462 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	CALML3	P27482	149 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	ADCYAP1R1	P41586	468 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	MAGEA10	P43363	369 aa	Predicted RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	FXR1	P51114	621 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	STAT2	P52630	851 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	RTP1	P59025	263 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	LRRC41	Q15345	812 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF792	Q3KQV3	632 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	AKNAD1	Q5T1N1	836 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	SYDE2	Q5VT97	1194 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	RCSD1	Q6JBY9	416 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	TMED8	Q6PL24	325 aa	Predicted RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	MFSD6	Q6ZSS7	791 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	NOL8	Q76FK4	1167 aa	Known RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171		Q7L0L9	218 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	ARMCX2	Q7L311	632 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	SH3RF1	Q7Z6J0	888 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	CCDC144CP	Q8IYA2	1237 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	MB21D1	Q8N884	522 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	SHCBP1	Q8NEM2	672 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	TCEANC2	Q96MN5	208 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	FAM161B	Q96MY7	647 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	TRERF1	Q96PN7	1200 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	MROH8	Q9H579	483 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	SLC38A10	Q9HBR0	1119 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	A1CF	Q9NQ94	594 aa	Known RBP	5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	XPNPEP3	Q9NQH7	507 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	PDGFC	Q9NRA1	345 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	FEM1B	Q9UK73	627 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	OGDHL	Q9ULD0	1010 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	PTPRS	Q13332	1948 aa		5.26	□□□□□ -1.57
LINC00649-219	ENST00000622171	TNKS	O95271	1327 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	SYNRG	Q9UMZ2	1314 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	UNC80	Q8N2C7	3258 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	KAT6A	Q92794	2004 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	hCG_1642624	A0A1W2PR95	340 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	SOWAHB	A6NEL2	793 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	KBTBD13	C9JR72	458 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	POTEB2	H3BUK9	544 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF213	O14771	459 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ORC4	O43929	436 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	DTNB	O60941	627 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	IGSF3	O75054	1194 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	PPFIA3	O75145	1194 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	SLC25A27	O95847	323 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	SNAI1	O95863	264 aa	Predicted RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	C6orf222	P0C671	652 aa	Predicted RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	PDHB	P11177	359 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	TOP1	P11387	765 aa	Known RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	CHML	P26374	656 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	HOMER1	Q86YM7	354 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	STAG2	Q8N3U4	1231 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ENAH	Q8N8S7	591 aa	Predicted RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	PRPF38A	Q8NAV1	312 aa	Known RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	GMCL1P1	Q8NEA9	526 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	STAG1	Q8WVM7	1258 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	TBC1D5	Q92609	795 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	COPS5	Q92905	334 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	TINF2	Q9BSI4	451 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ACAD9	Q9H845	621 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF287	Q9HBT7	754 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ANAPC4	Q9UJX5	808 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	ADAMTS5	Q9UNA0	930 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	TANC1	Q9C0D5	1861 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	WDR81	Q562E7	1941 aa		5.25	□□□□□ -1.57
LINC00649-219	ENST00000622171	SEPT4	O43236	478 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	SLC34A2	O95436	690 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	CYP21A2	P08686	494 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	HOXC6	P09630	235 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	RARB	P10826	455 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	COL6A1	P12109	1028 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	CPA1	P15085	419 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	ITGB8	P26012	769 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	ANTXR2	P58335	489 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	PSMC6	P62333	389 aa		5.24	□□□□□ -1.57
LINC00649-219	ENST00000622171	ZNF543	Q08ER8	600 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms