RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 IL6STP40189 918 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-211ENST00000622020 MTIF2P46199 727 aaKnown RBP17.66■□□□□ 0.42
NPHP4-211ENST00000622020 STIM1Q13586 685 aa17.66■□□□□ 0.42
NPHP4-211ENST00000622020 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
NPHP4-211ENST00000622020 AFAP1L1Q8TED9 768 aa17.66■□□□□ 0.42
NPHP4-211ENST00000622020 DYNLL2Q96FJ2 89 aa17.66■□□□□ 0.42
NPHP4-211ENST00000622020 CRACR2AQ9BSW2 395 aa17.66■□□□□ 0.42
NPHP4-211ENST00000622020 USP17L8P0C7I0 530 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 FECHP22830 423 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 TUBB2AQ13885 445 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-211ENST00000622020 TUBB2BQ9BVA1 445 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 MYO1AQ9UBC5 1043 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 LRWD1Q9UFC0 647 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 HPCAL4Q9UM19 191 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 KRT86O43790 486 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 TRIM14Q14142 442 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 ACBD3Q9H3P7 528 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 FAM207AQ9NSI2 230 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-211ENST00000622020 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
NPHP4-211ENST00000622020 SLIT2O94813 1529 aa17.64■□□□□ 0.42
NPHP4-211ENST00000622020 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PSMA7O14818 248 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 MLXIPQ9HAP2 919 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 ZNHIT6Q9NWK9 470 aaKnown RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 EIF3CLB5ME19 914 aaKnown RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PSMD14O00487 310 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 IVLP07476 585 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CALM1P0DP23 149 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CALM2P0DP24 149 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CALM3P0DP25 149 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CRKLP46109 303 aaKnown RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 STK4Q13043 487 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 ANKRD40Q6AI12 368 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 WDR93Q6P2C0 686 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 RRP36Q96EU6 259 aaKnown RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 EIF3CQ99613 913 aaKnown RBP17.64■□□□□ 0.41
NPHP4-211ENST00000622020 SELENOOQ9BVL4 669 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 ANAPC4Q9UJX5 808 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 CAPN11Q9UMQ6 739 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PLEKHG2Q9H7P9 1386 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 USP17L3A6NCW0 530 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 USP17L4A6NCW7 530 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 RCAN1P53805 252 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 TFAP4Q01664 338 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 MECOMQ03112 1051 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 PDE4DQ08499 809 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 USP17L1Q7RTZ2 530 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
NPHP4-211ENST00000622020 RASSF10A6NK89 507 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 C4orf32Q8N8J7 132 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 ZNF507Q8TCN5 953 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 NOC4LQ9BVI4 516 aaKnown RBP17.63■□□□□ 0.41
NPHP4-211ENST00000622020 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
NPHP4-211ENST00000622020 SLAIN2Q9P270 581 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 GOLGB1Q14789 3259 aaKnown RBP17.63■□□□□ 0.41
NPHP4-211ENST00000622020 ASIC1P78348 528 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 LETM2Q2VYF4 491 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 SLC51AQ86UW1 340 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 FAM84BQ96KN1 310 aaPredicted RBP17.63■□□□□ 0.41
NPHP4-211ENST00000622020 CNOT6LQ96LI5 555 aaKnown RBP17.63■□□□□ 0.41
NPHP4-211ENST00000622020 DNAJC7Q99615 494 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 EXOC1Q9NV70 894 aa17.63■□□□□ 0.41
NPHP4-211ENST00000622020 EXOC5O00471 708 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 DDAH1O94760 285 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 KRT83P78385 493 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 SND1Q7KZF4 910 aaKnown RBP eCLIP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 CCDC42Q96M95 316 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 SLC39A2Q9NP94 309 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 DMGDHQ9UI17 866 aaKnown RBP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 CAPN6Q9Y6Q1 641 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 NCK2O43639 380 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 KLRC4O43908 158 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 MOCS3O95396 460 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 ERFEQ4G0M1 354 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 C2CD5Q86YS7 1000 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 SLC44A5Q8NCS7 719 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 DUSP9Q99956 384 aaKnown RBP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 LRRC1Q9BTT6 524 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 MED4Q9NPJ6 270 aa17.62■□□□□ 0.41
NPHP4-211ENST00000622020 COL1A1P02452 1464 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-211ENST00000622020 ZNF263O14978 683 aa17.61■□□□□ 0.41
NPHP4-211ENST00000622020 PLCG1P19174 1290 aa17.61■□□□□ 0.41
NPHP4-211ENST00000622020 CYLC1P35663 651 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-211ENST00000622020 KIF5AQ12840 1032 aa17.61■□□□□ 0.41
NPHP4-211ENST00000622020 ENOX2Q16206 610 aaKnown RBP17.61■□□□□ 0.41
NPHP4-211ENST00000622020 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
NPHP4-211ENST00000622020 EPHB6O15197 1021 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms