RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 CNTNAP1P78357 1384 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 TMEM232C9JQI7 657 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 HLA-DOAP06340 250 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 SBK1Q52WX2 424 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 ZFPM1Q8IX07 1006 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 CSRNP2Q9H175 543 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 DHX36Q9H2U1 1008 aaKnown RBP19.83■□□□□ 0.77
FAM3A-222ENST00000621967 CLEC11AQ9Y240 323 aa19.83■□□□□ 0.77
FAM3A-222ENST00000621967 SLU7O95391 586 aaKnown RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 CALM1P0DP23 149 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 CALM2P0DP24 149 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 CALM3P0DP25 149 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 CYP2D6P10635 497 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 AKAP17AQ02040 695 aaKnown RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 TROAPQ12815 778 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 TBX2Q13207 712 aaPredicted RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 RASA3Q14644 834 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 FCHSD1Q86WN1 690 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 TMEM39BQ9GZU3 492 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 BAZ2BQ9UIF8 2168 aaKnown RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 COL2A1P02458 1487 aaPredicted RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 TRIM75PA6NK02 468 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 TOP1P11387 765 aaKnown RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 KRT2P35908 639 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 IFIT1BQ5T764 474 aaKnown RBP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 C12orf60Q5U649 245 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 CATIPQ7Z7H3 387 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 SULF1Q8IWU6 871 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 DEFB129Q9H1M3 183 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 VPS54Q9P1Q0 977 aa19.82■□□□□ 0.76
FAM3A-222ENST00000621967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
FAM3A-222ENST00000621967 ATRNL1Q5VV63 1379 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 DDAH1O94760 285 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 USP49Q70CQ1 688 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 TMEM139Q8IV31 216 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
FAM3A-222ENST00000621967 GPBP1L1Q9HC44 474 aaPredicted RBP19.81■□□□□ 0.76
FAM3A-222ENST00000621967 FAM205CA6NFA0 338 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 DDTLA6NHG4 134 aaPredicted RBP19.8■□□□□ 0.76
FAM3A-222ENST00000621967 PLCD1P51178 756 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 TNFRSF25Q93038 417 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 NFE2L3Q9Y4A8 694 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 ORC4O43929 436 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 PLEKHA8P1O95397 391 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 BMP15O95972 392 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 ERCC5P28715 1186 aaPredicted RBP19.8■□□□□ 0.76
FAM3A-222ENST00000621967 CBX1P83916 185 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 NPY5RQ15761 445 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 EARS2Q5JPH6 523 aaKnown RBP19.8■□□□□ 0.76
FAM3A-222ENST00000621967 CT47A1Q5JQC4 288 aaPredicted RBP19.8■□□□□ 0.76
FAM3A-222ENST00000621967 SYT10Q6XYQ8 523 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 TMTC3Q6ZXV5 915 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 SH3RF1Q7Z6J0 888 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 MED15Q96RN5 788 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 PHLPP2Q6ZVD8 1323 aa19.8■□□□□ 0.76
FAM3A-222ENST00000621967 ETF1P62495 437 aaKnown RBP19.79■□□□□ 0.76
FAM3A-222ENST00000621967 EVX2Q03828 476 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 KRT26Q7Z3Y9 468 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 GRAMD1CQ8IYS0 662 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 ZNF397Q8NF99 534 aaPredicted RBP19.79■□□□□ 0.76
FAM3A-222ENST00000621967 TRIM34Q9BYJ4 488 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 PI4KBQ9UBF8 816 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 PPP2R3BQ9Y5P8 575 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 CNTNAP5Q8WYK1 1306 aa19.79■□□□□ 0.76
FAM3A-222ENST00000621967 POTEIP0CG38 1075 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 POTEJP0CG39 1038 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 ATP2B1P20020 1258 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 PDILTQ8N807 584 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 FERMT2Q96AC1 680 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 PGAP2Q9UHJ9 254 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 SERPINB13Q9UIV8 391 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 V9GY48 417 aaPredicted RBP19.78■□□□□ 0.76
FAM3A-222ENST00000621967 ROBO3Q96MS0 1386 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 A0A087X0B3 334 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 ARHGAP6O43182 974 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 LDHDQ86WU2 507 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 REXO1L1PQ8IX06 675 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 OGFRQ9NZT2 677 aa19.78■□□□□ 0.76
FAM3A-222ENST00000621967 POLR2AP24928 1970 aaKnown RBP19.78■□□□□ 0.76
FAM3A-222ENST00000621967 ADM5C9JUS6 153 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 PRDM1O75626 825 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 SLFN14P0C7P3 912 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 TRIM65Q6PJ69 517 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 CDAN1Q8IWY9 1227 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 DYNLL2Q96FJ2 89 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 CCDC34Q96HJ3 373 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 EHD4Q9H223 541 aa19.77■□□□□ 0.76
FAM3A-222ENST00000621967 SPECC1LQ69YQ0 1117 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 ZNF287Q9HBT7 754 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 BRMS1Q9HCU9 246 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 DDX41Q9UJV9 622 aaKnown RBP19.76■□□□□ 0.75
FAM3A-222ENST00000621967 SPDYE4A6NLX3 237 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 WNT7AO00755 349 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 ZSCAN20P17040 1043 aaPredicted RBP19.76■□□□□ 0.75
FAM3A-222ENST00000621967 YY1P25490 414 aa19.76■□□□□ 0.75
FAM3A-222ENST00000621967 TRMT44Q8IYL2 757 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms