RNA–Protein interactions for RNA: ENST00000621516.1

CYFIP2-223, Transcript of cytoplasmic FMR1 interacting protein 2, human

TSL 5

Gene CYFIP2, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-223	ENST00000621516	PBX4	Q9BYU1	374 aa		13.16	□□□□□ -0.3
CYFIP2-223	ENST00000621516	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.16	□□□□□ -0.3
CYFIP2-223	ENST00000621516	SLC38A10	Q9HBR0	1119 aa		13.16	□□□□□ -0.3
CYFIP2-223	ENST00000621516	PLIN4	Q96Q06	1357 aa		13.16	□□□□□ -0.3
CYFIP2-223	ENST00000621516	ZEB2	O60315	1214 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	RASA1	P20936	1047 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	NKX3-2	P78367	333 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	CCDC144B	Q3MJ40	725 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	GNAS	Q5JWF2	1037 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	CPXCR1	Q8N123	301 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	USP38	Q8NB14	1042 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	GMCL1P1	Q8NEA9	526 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	PANK1	Q8TE04	598 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	GPATCH3	Q96I76	525 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	NUP88	Q99567	741 aa	Predicted RBP	13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	ACAD9	Q9H845	621 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	IL23A	Q9NPF7	189 aa		13.15	□□□□□ -0.3
CYFIP2-223	ENST00000621516	MUC3A	Q02505	3323 aa		13.15	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MYH4	Q9Y623	1939 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MYADML2	A6NDP7	307 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ASB14	A6NK59	587 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ZFY	P08048	801 aa	Predicted RBP	13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CSF2RA	P15509	400 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TKFC	Q3LXA3	575 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	HERVK_113	Q902F9	699 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	KIFC2	Q96AC6	838 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PPP1R12C	Q9BZL4	782 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	LRRCC1	Q9C099	1032 aa		13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PUS7L	Q9H0K6	701 aa	Known RBP	13.14	□□□□□ -0.31
CYFIP2-223	ENST00000621516	IGKV6D-41	A0A0C4DH26	115 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TTLL1	O95922	423 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SLC4A3	P48751	1232 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TDO2	P48775	406 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	STAT2	P52630	851 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MRPS5	P82675	430 aa	Known RBP	13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ZNF365	Q70YC5	407 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	FAM160B2	Q86V87	743 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	APPBP2	Q92624	585 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MKL1	Q969V6	931 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ASB2	Q96Q27	587 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	STRBP	Q96SI9	672 aa	Known RBP	13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	BCL11A	Q9H165	835 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	HIPK3	Q9H422	1215 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PRDM12	Q9H4Q4	367 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SLC28A3	Q9HAS3	691 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	RAVER2	Q9HCJ3	691 aa	Known RBP	13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ZBTB40	Q9NUA8	1239 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	RIPK3	Q9Y572	518 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	LRRC37A2	A6NM11	1700 aa		13.13	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CD4	P01730	458 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SLC3A2	P08195	630 aa	Known RBP	13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PFKM	P08237	780 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	BMP3	P12645	472 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TNFAIP2	Q03169	654 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	NOL8	Q76FK4	1167 aa	Known RBP	13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TLK2	Q86UE8	772 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CCDC144CP	Q8IYA2	1237 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	RPUSD2	Q8IZ73	545 aa	Known RBP	13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	KBTBD3	Q8NAB2	608 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CHURC1	Q8WUH1	139 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	NACAP1	Q9BZK3	213 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	AP5M1	Q9H0R1	490 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ECHDC1	Q9NTX5	307 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MTMR4	Q9NYA4	1195 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CLIP2	Q9UDT6	1046 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MCM3AP	O60318	1980 aa		13.12	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CHD9	Q3L8U1	2897 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MYO9B	Q13459	2157 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	GSG1L2	A8MUP6	293 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	MINDY4B	A8MYZ0	360 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SMIM22	K7EJ46	135 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	FGB	P02675	491 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	COL9A1	P20849	921 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PDE4B	Q07343	736 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	AAK1	Q2M2I8	961 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SLFNL1	Q499Z3	407 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	C16orf59	Q7L2K0	433 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	FAM133A	Q8N9E0	248 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	SLC43A3	Q8NBI5	491 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ADAMTS19	Q8TE59	1207 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	CEP95	Q96GE4	821 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	FGD4	Q96M96	766 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	UHRF1	Q96T88	793 aa	Predicted RBP	13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	KATNBL1	Q9H079	304 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	RNF146	Q9NTX7	359 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ISY1	Q9ULR0	285 aa	Known RBP	13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	COG6	Q9Y2V7	657 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516		Q9Y3F1	56 aa		13.11	□□□□□ -0.31
CYFIP2-223	ENST00000621516	LOC102724159	A0A0B4J2E5	919 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	GPAA1	O43292	621 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	ADCY6	O43306	1168 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PLA2G6	O60733	806 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TSPY3	P0CV98	308 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	TSPY8	P0CW00	308 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	IGFBP4	P22692	258 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	PBX2	P40425	430 aa		13.1	□□□□□ -0.31
CYFIP2-223	ENST00000621516	IK	Q13123	557 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms