RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-216ENST00000621396 RCOR1Q9UKL0 485 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 CSADQ9Y600 493 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 M0R2N6 131 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 NF2P35240 595 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 USP17L6PQ6QN14 398 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 POLR3EQ9NVU0 708 aa18.24■□□□□ 0.51
CBWD3-216ENST00000621396 FLOT1O75955 427 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 CALML3P27482 149 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 UBE2HP62256 183 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 ZNF174Q15697 407 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 INF2Q27J81 1249 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 KLHL40Q2TBA0 621 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 BTNL9Q6UXG8 535 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 SYNPO2Q9UMS6 1093 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 PCDHA7Q9UN72 937 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 AFG3L2Q9Y4W6 797 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 IRF6O14896 467 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
CBWD3-216ENST00000621396 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 C6orf50Q9HD87 102 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 DOCK1Q14185 1865 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 WDR90Q96KV7 1748 aa18.23■□□□□ 0.51
CBWD3-216ENST00000621396 CENPFP49454 3210 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 SPTLC2O15270 562 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 LIG1P18858 919 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 CLIC6Q96NY7 704 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 NASPP49321 788 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-216ENST00000621396 GRIN1Q05586 938 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 PTPAQ15257 358 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 RILPL1Q5EBL4 403 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 SPECC1Q5M775 1068 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 FBXO11Q86XK2 927 aa18.22■□□□□ 0.51
CBWD3-216ENST00000621396 ELP1O95163 1332 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 CCDC194A0A1B0GVG4 234 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 PEX10O60683 326 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 GNA11P29992 359 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 MCM7P33993 719 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 CCDC12Q8WUD4 166 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-216ENST00000621396 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 LPAR1Q92633 364 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 AGBL1Q96MI9 1066 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 AMNQ9BXJ7 453 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 PSTPIP2Q9H939 334 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 WDR46O15213 610 aaKnown RBP18.21■□□□□ 0.51
CBWD3-216ENST00000621396 ADCY7P51828 1080 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 CSPP1Q1MSJ5 1256 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 NOL9Q5SY16 702 aaKnown RBP18.21■□□□□ 0.51
CBWD3-216ENST00000621396 REXO1Q8N1G1 1221 aaKnown RBP18.21■□□□□ 0.51
CBWD3-216ENST00000621396 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
CBWD3-216ENST00000621396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.2■□□□□ 0.5
CBWD3-216ENST00000621396 HOXA13P31271 388 aaPredicted RBP18.2■□□□□ 0.5
CBWD3-216ENST00000621396 MKRN3Q13064 507 aaKnown RBP18.2■□□□□ 0.5
CBWD3-216ENST00000621396 SLC39A14Q15043 492 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 ANKRD13AQ8IZ07 590 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 GINM1Q9NU53 330 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 USP14P54578 494 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 SKOR2Q2VWA4 1001 aaPredicted RBP18.2■□□□□ 0.5
CBWD3-216ENST00000621396 TREML2Q5T2D2 321 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 ATL3Q6DD88 541 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
CBWD3-216ENST00000621396 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 HOMER2Q9NSB8 354 aa18.2■□□□□ 0.5
CBWD3-216ENST00000621396 OPLAHO14841 1288 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
CBWD3-216ENST00000621396 DAGLBQ8NCG7 672 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 GOLPH3LQ9H4A5 285 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 A0A1B0GVL5 298 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 NR1I2O75469 434 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 YEATS4O95619 227 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 TTC38Q5R3I4 469 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 TBCKQ8TEA7 893 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 OPTNQ96CV9 577 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 ATG4CQ96DT6 458 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 UIMC1Q96RL1 719 aa18.19■□□□□ 0.5
CBWD3-216ENST00000621396 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
CBWD3-216ENST00000621396 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
CBWD3-216ENST00000621396 PTMSP20962 102 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 LETM2Q2VYF4 491 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 CUL5Q93034 780 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 RIC8AQ9NPQ8 531 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms