RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
POLR2J3-221ENST00000621093 LCTP09848 1927 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 PLXNA1Q9UIW2 1896 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 GPR25O00155 361 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 FOXN1O15353 648 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 CTGFP29279 349 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 RCAN1P53805 252 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 ERVK-24P63145 666 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 NTRK3Q16288 839 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 QRICH1Q2TAL8 776 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 MTMR8Q96EF0 704 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
POLR2J3-221ENST00000621093 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 GNAQP50148 359 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 SNRNP48Q6IEG0 339 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 CCDC83Q8IWF9 413 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 GPRC5AQ8NFJ5 357 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 PHKBQ93100 1093 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 LZTS2Q9BRK4 669 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 ARHGAP39Q9C0H5 1083 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 SPATC1LQ9H0A9 340 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 PORCNQ9H237 461 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-221ENST00000621093 HSPA8P11142 646 aaKnown RBP12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 STAT3P40763 770 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 FAM110CQ1W6H9 321 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 USH1GQ495M9 461 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 MB21D1Q8N884 522 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 TMX3Q96JJ7 454 aa12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-221ENST00000621093 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 ZBTB5O15062 677 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 ICAM1P05362 532 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 FDX1P10109 184 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 ALAS1P13196 640 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 IFNAR1P17181 557 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 SMARCA1P28370 1054 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 SP3Q02447 781 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 PPP2R5BQ15173 497 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 NCAPG2Q86XI2 1143 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 COA7Q96BR5 231 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 HOMER2Q9NSB8 354 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 CCPG1Q9ULG6 757 aa12.67□□□□□ -0.38
POLR2J3-221ENST00000621093 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 CPLX1O14810 134 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 JAK2O60674 1132 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 FKTNO75072 461 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 ERCC3P19447 782 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 LBX1P52954 281 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 OAZ1P54368 228 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 PKN1Q16512 942 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 NSUN7Q8NE18 718 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
POLR2J3-221ENST00000621093 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 PSMC4P43686 418 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 MCM2P49736 904 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 SHISA4Q96DD7 197 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 AIFM3Q96NN9 605 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 MCM3APO60318 1980 aa12.65□□□□□ -0.38
POLR2J3-221ENST00000621093 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 NFIBO00712 420 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 OPLAHO14841 1288 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 SLC25A27O95847 323 aa12.64□□□□□ -0.39
POLR2J3-221ENST00000621093 FDPSP14324 419 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms