RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SEC31AO94979 1220 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 EN1Q05925 392 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 HERC4Q5GLZ8 1057 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 TOGARAM2Q6ZUX3 1019 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 MLKLQ8NB16 471 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 SDK1Q7Z5N4 2213 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 TUBB4AP04350 444 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 PTPREP23469 700 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 IGBP1P78318 339 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 CYP4A11Q02928 519 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 PTPROQ16827 1216 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 ZNF446Q9NWS9 450 aa9.23□□□□□ -0.93
PTPDC1-204ENST00000620992 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 ERLIN1O75477 346 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 FLOT1O75955 427 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 PDE6BP35913 854 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 SLC16A2P36021 539 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 LMAN1P49257 510 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 TERF2Q15554 542 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 TPH2Q8IWU9 490 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 EPSTI1Q96J88 318 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 CAPZA3Q96KX2 299 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 WDR24Q96S15 920 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 TACC3Q9Y6A5 838 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 BAZ2BQ9UIF8 2168 aaKnown RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 TNKSO95271 1327 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 SMIM22K7EJ46 135 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 KRT9P35527 623 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 BTDP43251 543 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 PPARAQ07869 468 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 PSMB7Q99436 277 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 INTS13Q9NVM9 706 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 SUSD4Q5VX71 490 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 GUCA1BQ9UMX6 200 aa9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 COL5A2P05997 1499 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-204ENST00000620992 SMIM23A6NLE4 172 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 KCNJ6P48051 423 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 UBXN1Q04323 297 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 PPP2R3AQ06190 1150 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 MTF1Q14872 753 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 KANK3Q6NY19 840 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 TRIM65Q6PJ69 517 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 NCAPG2Q86XI2 1143 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 ANKRD35Q8N283 1001 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 OTUD6BQ8N6M0 293 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 BLZF1Q9H2G9 400 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 AFF2P51816 1311 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 KRT19P08727 400 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 SLFN14P0C7P3 912 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 KRT5P13647 590 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 GBP2P32456 591 aaPredicted RBP9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 ACTN2P35609 894 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 ALX1Q15699 326 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 TXLNBQ8N3L3 684 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 IQUBQ8NA54 791 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 SNX29Q8TEQ0 813 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 CSRNP1Q96S65 589 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 PLEKHA4Q9H4M7 779 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 STK36Q9NRP7 1315 aa9.21□□□□□ -0.93
PTPDC1-204ENST00000620992 LAMB4A4D0S4 1761 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 COL18A1P39060 1754 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 SPEF2Q9C093 1822 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 TJP1Q07157 1748 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 TEX33O43247 280 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 PDE4DQ08499 809 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 PPP2R5DQ14738 602 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC93Q567U6 631 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 IGSF22Q8N9C0 903 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 PPP1R16BQ96T49 567 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 GOLGA6L10A0A0M3HER8 536 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 GOLGA6L9A6NEM1 432 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 AKR1B15C9JRZ8 316 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 SPOUT1Q5T280 376 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 STAG1Q8WVM7 1258 aa9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 MRRFQ96E11 262 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
PTPDC1-204ENST00000620992 GON4LQ3T8J9 2241 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 ARHGEF35A5YM69 484 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 STX10O60499 249 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 CCDC175P0C221 793 aa9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 H2AFXP16104 143 aaPredicted RBP9.2□□□□□ -0.94
PTPDC1-204ENST00000620992 SNAP25P60880 206 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms