RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HLTFQ14527 1009 aaKnown RBP eCLIP7.76□□□□□ -1.172e-7■□□□□ 10.4
NEDD9-216ENST00000620854 IQUBQ8NA54 791 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 ZBTB38Q8NAP3 1195 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-216ENST00000620854 KAT2BQ92831 832 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 SHISA4Q96DD7 197 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 GSDMAQ96QA5 445 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 CAPS2Q9BXY5 557 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 GSG1L2A8MUP6 293 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 NDUFAB1O14561 156 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 ADAMTS3O15072 1205 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 NMT2O60551 498 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 ATP2C2O75185 946 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 KRT14P02533 472 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 POLD1P28340 1107 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 KRT2P35908 639 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 PBX1P40424 430 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 UBA7P41226 1012 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 KCNQ4P56696 695 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 AMPD2Q01433 879 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 TBC1D8BQ0IIM8 1120 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 TTC38Q5R3I4 469 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 IQCEQ6IPM2 695 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 SGMS1Q86VZ5 419 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 RNF41Q9H4P4 317 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-216ENST00000620854 CAPN7Q9Y6W3 813 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 TNKSO95271 1327 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 SPATA31A6Q5VVP1 1343 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 MYH10P35580 1976 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 KRT86O43790 486 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 CYP7A1P22680 504 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 HSPA1LP34931 641 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 LIFRP42702 1097 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 PAFAH1B1P43034 410 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 HPS3Q969F9 1004 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 ARL8AQ96BM9 186 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 MTRQ99707 1265 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 XDHP47989 1333 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 CDHR2Q9BYE9 1310 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 SHTN1A0MZ66 631 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 AGPSO00116 658 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 NCK2O43639 380 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 PRPF6O94906 941 aaKnown RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 GUCY2CP25092 1073 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 HERVK_113P62684 666 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 TYW1BQ6NUM6 668 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 TRAPPC11Q7Z392 1133 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 PROCA1Q8NCQ7 364 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 KRT23Q9C075 422 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 MLXIPQ9HAP2 919 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 LRWD1Q9UFC0 647 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 RIPOR2Q9Y4F9 1068 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 MYO1FO00160 1098 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 NKRFO15226 690 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 INPP5BP32019 993 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 STAT6P42226 847 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 GUCY2FP51841 1108 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 CTSWP56202 376 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 EVX2Q03828 476 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 RASGRF1Q13972 1273 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 PUM3Q15397 648 aaKnown RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 CCNI2Q6ZMN8 369 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 ZNF804AQ7Z570 1209 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 CATIPQ7Z7H3 387 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 EFCAB13Q8IY85 973 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 SPATA5Q8NB90 893 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 JPH2Q9BR39 696 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 HAUS4Q9H6D7 363 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 FAM207AQ9NSI2 230 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 STX8Q9UNK0 236 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 A0A087WUV0 522 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 WTIPA6NIX2 430 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 BACH1O14867 736 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 BUB1O43683 1085 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 PDE8BO95263 885 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 RPN1P04843 607 aaKnown RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 KIF5AQ12840 1032 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 UBE3CQ15386 1083 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 FAM47AQ5JRC9 791 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 NFRKBQ6P4R8 1299 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 SPATA20Q8TB22 786 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 RBM17Q96I25 401 aaKnown RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 GJD4Q96KN9 370 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC42Q96M95 316 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 AATFQ9NY61 560 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD9-216ENST00000620854 JAG2Q9Y219 1238 aa7.75□□□□□ -1.17
NEDD9-216ENST00000620854 ZSCAN5CA6NGD5 496 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 TSPY2A6NKD2 308 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 AKR1B10O60218 316 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MOCS3O95396 460 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 HPDP32754 393 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC178Q5BJE1 867 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 IFIT1BQ5T764 474 aaKnown RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 WDR93Q6P2C0 686 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 WDR59Q6PJI9 974 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ZNF579Q8NAF0 562 aaKnown RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 FLAD1Q8NFF5 587 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 MS4A14Q96JA4 679 aa7.74□□□□□ -1.17
NEDD9-216ENST00000620854 NHEJ1Q9H9Q4 299 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-216ENST00000620854 ANKRD62A6NC57 917 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms