RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ALDH1A1P00352 501 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 CTGFP29279 349 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 KIF5BP33176 963 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 PORCNQ9H237 461 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 SLKQ9H2G2 1235 aaPredicted RBP15.85■□□□□ 0.13
NEK3-210ENST00000620675 RANBP17Q9H2T7 1088 aaKnown RBP15.85■□□□□ 0.13
NEK3-210ENST00000620675 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 RCAN1P53805 252 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 ERVK-24P63145 666 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 PLS1Q14651 629 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 QRICH1Q2TAL8 776 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 GTF3C6Q969F1 213 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 MYPNQ86TC9 1320 aa15.85■□□□□ 0.13
NEK3-210ENST00000620675 LCTP09848 1927 aa15.84■□□□□ 0.13
NEK3-210ENST00000620675 CDC37Q16543 378 aaPredicted RBP15.84■□□□□ 0.13
NEK3-210ENST00000620675 CCDC83Q8IWF9 413 aa15.84■□□□□ 0.13
NEK3-210ENST00000620675 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
NEK3-210ENST00000620675 TMX3Q96JJ7 454 aa15.84■□□□□ 0.13
NEK3-210ENST00000620675 ARHGAP39Q9C0H5 1083 aa15.84■□□□□ 0.13
NEK3-210ENST00000620675 FOXN1O15353 648 aa15.83■□□□□ 0.13
NEK3-210ENST00000620675 SPZ1Q9BXG8 430 aa15.83■□□□□ 0.13
NEK3-210ENST00000620675 CFHR5Q9BXR6 569 aa15.83■□□□□ 0.13
NEK3-210ENST00000620675 RBM28Q9NW13 759 aaKnown RBP15.83■□□□□ 0.13
NEK3-210ENST00000620675 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.13
NEK3-210ENST00000620675 JAK2O60674 1132 aa15.83■□□□□ 0.12
NEK3-210ENST00000620675 HSPA1AP0DMV8 641 aaKnown RBP15.83■□□□□ 0.12
NEK3-210ENST00000620675 HSPA1BP0DMV9 641 aaKnown RBP15.83■□□□□ 0.12
NEK3-210ENST00000620675 MOV10L1Q9BXT6 1211 aaKnown RBP15.83■□□□□ 0.12
NEK3-210ENST00000620675 SPATC1LQ9H0A9 340 aa15.83■□□□□ 0.12
NEK3-210ENST00000620675 EFCC1Q9HA90 598 aa15.83■□□□□ 0.12
NEK3-210ENST00000620675 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
NEK3-210ENST00000620675 V9GY48 417 aaPredicted RBP15.83■□□□□ 0.12
NEK3-210ENST00000620675 MCM3APO60318 1980 aa15.83■□□□□ 0.12
NEK3-210ENST00000620675 ZBED4O75132 1171 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
NEK3-210ENST00000620675 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 USH1GQ495M9 461 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 SNRNP48Q6IEG0 339 aaKnown RBP15.82■□□□□ 0.12
NEK3-210ENST00000620675 BEGAINQ9BUH8 593 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 HOMER2Q9NSB8 354 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 SAGE1Q9NXZ1 904 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 PLXNA1Q9UIW2 1896 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 GPR25O00155 361 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 STAT3P40763 770 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 GPRC5AQ8NFJ5 357 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 GPKOWQ92917 476 aaPredicted RBP eCLIP15.82■□□□□ 0.12
NEK3-210ENST00000620675 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
NEK3-210ENST00000620675 RBBP6Q7Z6E9 1792 aaKnown RBP15.81■□□□□ 0.12
NEK3-210ENST00000620675 IFNAR1P17181 557 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 GNAQP50148 359 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 PKN1Q16512 942 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 MB21D1Q8N884 522 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 ZNF296Q8WUU4 475 aaPredicted RBP15.81■□□□□ 0.12
NEK3-210ENST00000620675 COA7Q96BR5 231 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 SLC26A6Q9BXS9 759 aa15.81■□□□□ 0.12
NEK3-210ENST00000620675 ZBTB5O15062 677 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 ERCC3P19447 782 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 MUM1L1Q5H9M0 696 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 NSUN7Q8NE18 718 aaKnown RBP15.8■□□□□ 0.12
NEK3-210ENST00000620675 LZTS2Q9BRK4 669 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 CCPG1Q9ULG6 757 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 CCDC196A0A1B0GTZ2 297 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 CPLX1O14810 134 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 ICAM1P05362 532 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 ALAS1P13196 640 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
NEK3-210ENST00000620675 CD99L2Q8TCZ2 262 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 TEX13BQ9BXU2 312 aa15.8■□□□□ 0.12
NEK3-210ENST00000620675 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 ATP2A1O14983 1001 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 HSPA8P11142 646 aaKnown RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 SMARCA1P28370 1054 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 SP3Q02447 781 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 PPP2R5BQ15173 497 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 NCAPG2Q86XI2 1143 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 TBC1D5Q92609 795 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 GJB4Q9NTQ9 266 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 CTDP1Q9Y5B0 961 aaPredicted RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 NFIBO00712 420 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 OPLAHO14841 1288 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 LACTBP83111 547 aaPredicted RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 WDR78Q5VTH9 848 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 WWC2Q6AWC2 1192 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 FBXO11Q86XK2 927 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 RIOX2Q8IUF8 465 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 GTF3C2Q8WUA4 911 aaPredicted RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 SNX21Q969T3 373 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
NEK3-210ENST00000620675 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
NEK3-210ENST00000620675 PTPDC1A2A3K4 754 aa15.78■□□□□ 0.12
NEK3-210ENST00000620675 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
NEK3-210ENST00000620675 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms