RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 ZMYM6O95789 1325 aa28.37■■■□□ 2.13
ATXN3-252ENST00000620536 SNAI1O95863 264 aaPredicted RBP28.36■■■□□ 2.13
ATXN3-252ENST00000620536 SDSP20132 328 aa28.36■■■□□ 2.13
ATXN3-252ENST00000620536 LRCH3Q96II8 777 aa28.36■■■□□ 2.13
ATXN3-252ENST00000620536 OSBPL3Q9H4L5 887 aa28.36■■■□□ 2.13
ATXN3-252ENST00000620536 ACAD9Q9H845 621 aa28.36■■■□□ 2.13
ATXN3-252ENST00000620536 ZHX1Q9UKY1 873 aaPredicted RBP28.36■■■□□ 2.13
ATXN3-252ENST00000620536 NOVP48745 357 aa28.35■■■□□ 2.13
ATXN3-252ENST00000620536 TKFCQ3LXA3 575 aa28.35■■■□□ 2.13
ATXN3-252ENST00000620536 AGBL1Q96MI9 1066 aa28.35■■■□□ 2.13
ATXN3-252ENST00000620536 PHF24Q9UPV7 400 aa28.35■■■□□ 2.13
ATXN3-252ENST00000620536 DNAH12Q6ZR08 3092 aa28.35■■■□□ 2.13
ATXN3-252ENST00000620536 HAND2P61296 217 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 CCDC96Q2M329 555 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 CCDC174Q6PII3 467 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 DCAF4Q8WV16 495 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 RNF146Q9NTX7 359 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 PRR12Q9ULL5 1215 aa28.34■■■□□ 2.13
ATXN3-252ENST00000620536 ACVR2BQ13705 512 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 SNX17Q15036 470 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 LRIT3Q3SXY7 679 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 TRIM60Q495X7 471 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 MFSD6Q6ZSS7 791 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 LENG1Q96BZ8 264 aaPredicted RBP28.33■■■□□ 2.13
ATXN3-252ENST00000620536 TCP11L1Q9NUJ3 509 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.33■■■□□ 2.13
ATXN3-252ENST00000620536 ZNF536O15090 1300 aa28.33■■■□□ 2.13
ATXN3-252ENST00000620536 POTEB2H3BUK9 544 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 TOP1P11387 765 aaKnown RBP28.32■■■□□ 2.12
ATXN3-252ENST00000620536 PCP11498 1178 aaKnown RBP28.32■■■□□ 2.12
ATXN3-252ENST00000620536 ALAS1P13196 640 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 C1orf53Q5VUE5 145 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 TRERF1Q96PN7 1200 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 ABHD16BQ9H3Z7 469 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 PRDM5Q9NQX1 630 aaPredicted RBP28.32■■■□□ 2.12
ATXN3-252ENST00000620536 DIAPH3Q9NSV4 1193 aa28.32■■■□□ 2.12
ATXN3-252ENST00000620536 SNAP25P60880 206 aa28.31■■■□□ 2.12
ATXN3-252ENST00000620536 AKNAD1Q5T1N1 836 aa28.31■■■□□ 2.12
ATXN3-252ENST00000620536 ARMCX2Q7L311 632 aa28.31■■■□□ 2.12
ATXN3-252ENST00000620536 RASGRP2Q7LDG7 609 aa28.31■■■□□ 2.12
ATXN3-252ENST00000620536 TMEM47Q9BQJ4 181 aa28.31■■■□□ 2.12
ATXN3-252ENST00000620536 TSEN34Q9BSV6 310 aaKnown RBP28.31■■■□□ 2.12
ATXN3-252ENST00000620536 RNF41Q9H4P4 317 aaPredicted RBP28.31■■■□□ 2.12
ATXN3-252ENST00000620536 SYNRGQ9UMZ2 1314 aa28.3■■■□□ 2.12
ATXN3-252ENST00000620536 ADAMTS4O75173 837 aa28.3■■■□□ 2.12
ATXN3-252ENST00000620536 CWC27Q6UX04 472 aaKnown RBP28.3■■■□□ 2.12
ATXN3-252ENST00000620536 FGD4Q96M96 766 aa28.3■■■□□ 2.12
ATXN3-252ENST00000620536 A1CFQ9NQ94 594 aaKnown RBP28.3■■■□□ 2.12
ATXN3-252ENST00000620536 SZT2Q5T011 3432 aa28.3■■■□□ 2.12
ATXN3-252ENST00000620536 A0A1W2PQ45 241 aaPredicted RBP28.29■■■□□ 2.12
ATXN3-252ENST00000620536 A0A1W2PQY0 241 aa28.29■■■□□ 2.12
ATXN3-252ENST00000620536 HIP1O00291 1037 aa28.29■■■□□ 2.12
ATXN3-252ENST00000620536 DUSP11O75319 330 aaKnown RBP28.29■■■□□ 2.12
ATXN3-252ENST00000620536 CNTN2Q02246 1040 aa28.29■■■□□ 2.12
ATXN3-252ENST00000620536 CCDC144CPQ8IYA2 1237 aa28.29■■■□□ 2.12
ATXN3-252ENST00000620536 CCPG1Q9ULG6 757 aa28.29■■■□□ 2.12
ATXN3-252ENST00000620536 SUPT16HQ9Y5B9 1047 aaKnown RBP28.29■■■□□ 2.12
ATXN3-252ENST00000620536 ZNF213O14771 459 aa28.28■■■□□ 2.12
ATXN3-252ENST00000620536 GPR153Q6NV75 609 aa28.28■■■□□ 2.12
ATXN3-252ENST00000620536 FAM133AQ8N9E0 248 aa28.28■■■□□ 2.12
ATXN3-252ENST00000620536 TTC14Q96N46 770 aa28.28■■■□□ 2.12
ATXN3-252ENST00000620536 SPC25Q9HBM1 224 aa28.28■■■□□ 2.12
ATXN3-252ENST00000620536 SLC16A2P36021 539 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 TLE2Q04725 743 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 CCDC144BQ3MJ40 725 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 TTBK2Q6IQ55 1244 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 TBC1D10CQ8IV04 446 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 NUP133Q8WUM0 1156 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 ESR2Q92731 530 aa28.27■■■□□ 2.12
ATXN3-252ENST00000620536 FRMPD2Q68DX3 1309 aaPredicted RBP28.26■■■□□ 2.11
ATXN3-252ENST00000620536 MOXD2PA6NHM9 499 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 ASB14A6NK59 587 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 ICAM1P05362 532 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 ACLYP53396 1101 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 SYDE2Q5VT97 1194 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 BTNL9Q6UXG8 535 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 RANBP17Q9H2T7 1088 aaKnown RBP28.26■■■□□ 2.11
ATXN3-252ENST00000620536 GPCPD1Q9NPB8 672 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 PDLIM7Q9NR12 457 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 SMCHD1A6NHR9 2005 aa28.26■■■□□ 2.11
ATXN3-252ENST00000620536 SOWAHBA6NEL2 793 aa28.25■■■□□ 2.11
ATXN3-252ENST00000620536 KCNA10Q16322 511 aa28.25■■■□□ 2.11
ATXN3-252ENST00000620536 MUM1L1Q5H9M0 696 aa28.25■■■□□ 2.11
ATXN3-252ENST00000620536 KLHDC9Q8NEP7 349 aa28.25■■■□□ 2.11
ATXN3-252ENST00000620536 STARD7Q9NQZ5 370 aa28.25■■■□□ 2.11
ATXN3-252ENST00000620536 C6orf222P0C671 652 aaPredicted RBP28.24■■■□□ 2.11
ATXN3-252ENST00000620536 NSMFQ6X4W1 530 aa28.24■■■□□ 2.11
ATXN3-252ENST00000620536 PCSK9Q8NBP7 692 aaKnown RBP28.24■■■□□ 2.11
ATXN3-252ENST00000620536 CYP39A1Q9NYL5 469 aa28.24■■■□□ 2.11
ATXN3-252ENST00000620536 PQBP1O60828 265 aaKnown RBP28.23■■■□□ 2.11
ATXN3-252ENST00000620536 CLTBP09497 229 aa28.23■■■□□ 2.11
ATXN3-252ENST00000620536 PDHBP11177 359 aa28.23■■■□□ 2.11
ATXN3-252ENST00000620536 SH3RF1Q7Z6J0 888 aa28.23■■■□□ 2.11
ATXN3-252ENST00000620536 BADQ92934 168 aa28.23■■■□□ 2.11
ATXN3-252ENST00000620536 NEDD4P46934 1319 aa28.22■■■□□ 2.11
ATXN3-252ENST00000620536 TRIM43BA6NCK2 446 aa28.22■■■□□ 2.11
ATXN3-252ENST00000620536 ADCY6O43306 1168 aa28.22■■■□□ 2.11
ATXN3-252ENST00000620536 CST5P28325 142 aaPredicted RBP28.22■■■□□ 2.11
ATXN3-252ENST00000620536 NT5C2P49902 561 aa28.22■■■□□ 2.11
ATXN3-252ENST00000620536 GJA9P57773 515 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms