RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ARMCX6Q7L4S7 300 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 KBTBD3Q8NAB2 608 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 RUBCNQ92622 972 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 C8orf76Q96K31 380 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 ZNF570Q96NI8 536 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 SENP2Q9HC62 589 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 G3BP2Q9UN86 482 aaKnown RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 ANP32DO95626 131 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 CASP7P55210 303 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 LRRC23Q53EV4 343 aaPredicted RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 NCAPH2Q6IBW4 605 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 LMBR1LQ6UX01 489 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 RAD9BQ6WBX8 426 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 A0A0G2JS52 829 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 SOWAHDA6NJG2 315 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 ERVV-2B6SEH9 535 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 PLSCR1O15162 318 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 LUC7L3O95232 432 aaKnown RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 MYL1P05976 194 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 GHRP10912 638 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 PFKFB1P16118 471 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 SCTRP47872 440 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 PTPN21Q16825 1174 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 TRAPPC11Q7Z392 1133 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
VPS11-207ENST00000620429 POLR3EQ9NVU0 708 aa11.54□□□□□ -0.56
VPS11-207ENST00000620429 OPLAHO14841 1288 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 ATP4AP20648 1035 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 PDE6BP35913 854 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 RINLQ6ZS11 566 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 GDAP1L1Q96MZ0 367 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 DSCC1Q9BVC3 393 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 GPHNQ9NQX3 736 aaPredicted RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 QSER1Q2KHR3 1735 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 A0A0U1RQJ8 604 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 CUL3Q13618 768 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 TRIM42Q8IWZ5 723 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 ARL8AQ96BM9 186 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 SLC5A4Q9NY91 659 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 NOP53Q9NZM5 478 aaKnown RBP11.53□□□□□ -0.56
VPS11-207ENST00000620429 ASAP1Q9ULH1 1129 aa11.53□□□□□ -0.56
VPS11-207ENST00000620429 KCPQ6ZWJ8 1503 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 AKR1B15C9JRZ8 316 aaPredicted RBP11.52□□□□□ -0.56
VPS11-207ENST00000620429 OATP04181 439 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 HSPD1P10809 573 aaKnown RBP11.52□□□□□ -0.56
VPS11-207ENST00000620429 FOXO4P98177 505 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.56
VPS11-207ENST00000620429 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 TBC1D31Q96DN5 1066 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 BICD1Q96G01 975 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 RNPC3Q96LT9 517 aaKnown RBP11.52□□□□□ -0.56
VPS11-207ENST00000620429 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.56
VPS11-207ENST00000620429 GOLGA6L10A6NI86 522 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 CMA1P23946 247 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 MARCKSP29966 332 aaPredicted RBP11.52□□□□□ -0.57
VPS11-207ENST00000620429 SPRED3Q2MJR0 410 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
VPS11-207ENST00000620429 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 ARFGEF2Q9Y6D5 1785 aa11.52□□□□□ -0.57
VPS11-207ENST00000620429 ABLIM1O14639 778 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 SYKP43405 635 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 ZRSR2Q15696 482 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 DBN1Q16643 649 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 RAB11FIP4Q86YS3 637 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 RMI1Q9H9A7 625 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 BAIAP2L1Q9UHR4 511 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 FECHP22830 423 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 MDH1P40925 334 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 ZBED6P86452 979 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 GUCY1A3Q02108 690 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 RASA3Q14644 834 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 ACBD5Q5T8D3 534 aaPredicted RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 TEX9Q8N6V9 391 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 PIGBQ92521 554 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 IQCGQ9H095 443 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms