RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 USP17L17D6RBQ6 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L19D6RCP7 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L20D6RJB6 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 ZBTB5O15062 677 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 BRD1O95696 1058 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 SCG2P13521 617 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-209ENST00000620393 STAT2P52630 851 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L24Q0WX57 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 IKQ13123 557 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-209ENST00000620393 SNAPC2Q13487 334 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 DGKZQ13574 1117 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 COG2Q14746 738 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 CATSPERGQ6ZRH7 1159 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 FASTKD5Q7L8L6 764 aaKnown RBP9.27□□□□□ -0.93
CPNE3-209ENST00000620393 SAPCD2Q86UD0 394 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-209ENST00000620393 PIBF1Q8WXW3 757 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 C8orf76Q96K31 380 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 FBXO28Q9NVF7 368 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 HOXC10Q9NYD6 342 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 MTMR6Q9Y217 621 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
CPNE3-209ENST00000620393 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 H3BQV1 296 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-209ENST00000620393 FDX1P10109 184 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 XBP1P17861 261 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 GTF2A2P52657 109 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 MOGSQ13724 837 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 PKP1Q13835 747 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 TRIM29Q14134 588 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 IFFO2Q5TF58 517 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 KRT40Q6A162 431 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 RGMBQ6NW40 437 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 HOMER1Q86YM7 354 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-209ENST00000620393 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
CPNE3-209ENST00000620393 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
CPNE3-209ENST00000620393 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 ADAMTS5Q9UNA0 930 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 ZDHHC9Q9Y397 364 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
CPNE3-209ENST00000620393 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
CPNE3-209ENST00000620393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 FLOT1O75955 427 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 ZBTB48P10074 688 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 CETPP11597 493 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 ZNF157P51786 506 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 GUCY1B3Q02153 619 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 TRAF1Q13077 416 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 QRICH1Q2TAL8 776 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 TREML2Q5T2D2 321 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 WWC2Q6AWC2 1192 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 GADL1Q6ZQY3 521 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 EFCAB3Q8N7B9 438 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 CCDC102AQ96A19 550 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 HHIPL1Q96JK4 782 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 RANBP17Q9H2T7 1088 aaKnown RBP9.25□□□□□ -0.93
CPNE3-209ENST00000620393 GJB4Q9NTQ9 266 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 BARHL2Q9NY43 387 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 AGTPBP1Q9UPW5 1226 aa9.25□□□□□ -0.93
CPNE3-209ENST00000620393 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 VPS37CA5D8V6 355 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 STXBP3O00186 592 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 VWA5AO00534 786 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PPP1R11O60927 126 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 ZBED4O75132 1171 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 OSBPP22059 807 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 FOSBP53539 338 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 NLRP5P59047 1200 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 SNAP25P60880 206 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 SAFBQ15424 915 aaKnown RBP eCLIP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 GALNT17Q6IS24 598 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 HEATR3Q7Z4Q2 680 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 RASAL3Q86YV0 1011 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 CCDC12Q8WUD4 166 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 COA7Q96BR5 231 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 P2RX7Q99572 595 aaKnown RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 AMNQ9BXJ7 453 aa9.24□□□□□ -0.93
CPNE3-209ENST00000620393 ZSCAN16Q9H4T2 348 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-209ENST00000620393 SLC38A10Q9HBR0 1119 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms