RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 RHOXF2Q9BQY4 288 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 BRMS1Q9HCU9 246 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 LRP2BPQ9P2M1 347 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 DYNLL1P63167 89 aaKnown RBP14.7□□□□□ -0.06
SKP2-209ENST00000620197 NUP88Q99567 741 aaPredicted RBP14.7□□□□□ -0.06
SKP2-209ENST00000620197 TRIM49BA6NDI0 452 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
SKP2-209ENST00000620197 IVLP07476 585 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 LMAN1P49257 510 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 PIK3AP1Q6ZUJ8 805 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 RETREG2Q8NC44 543 aa14.7□□□□□ -0.06
SKP2-209ENST00000620197 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
SKP2-209ENST00000620197 WTIPA6NIX2 430 aaPredicted RBP14.69□□□□□ -0.06
SKP2-209ENST00000620197 PRPHP41219 470 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 AKAP17AQ02040 695 aaKnown RBP14.69□□□□□ -0.06
SKP2-209ENST00000620197 UBXN1Q04323 297 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 UBE4AQ14139 1066 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 NSUN4Q96CB9 384 aaKnown RBP14.69□□□□□ -0.06
SKP2-209ENST00000620197 HDAC6Q9UBN7 1215 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 MINDY4BA8MYZ0 360 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 TYW1BQ6NUM6 668 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 CCDC170Q8IYT3 715 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 COG1Q8WTW3 980 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
SKP2-209ENST00000620197 MYH7BA7E2Y1 1941 aa14.69□□□□□ -0.06
SKP2-209ENST00000620197 NMT2O60551 498 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 CTCFLQ8NI51 663 aaPredicted RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 NOC3LQ8WTT2 800 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 TOMM22Q9NS69 142 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 CWC15Q9P013 229 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 SLAIN2Q9P270 581 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 PCDHA4Q9UN74 947 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 PDE2AO00408 941 aaPredicted RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 ZNF263O14978 683 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 LACRTQ9GZZ8 138 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 SAR1BQ9Y6B6 198 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 BAZ2BQ9UIF8 2168 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 IGHMBP2P38935 993 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 NOP2P46087 812 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 ERGIC2Q96RQ1 377 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 RASSF4Q9H2L5 321 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 MAGEF1Q9HAY2 307 aa14.68□□□□□ -0.06
SKP2-209ENST00000620197 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
SKP2-209ENST00000620197 PRLRP16471 622 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 DNM2P50570 870 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 BLIDQ8IZY5 108 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
SKP2-209ENST00000620197 FAM84BQ96KN1 310 aaPredicted RBP14.67□□□□□ -0.06
SKP2-209ENST00000620197 SH3GL2Q99962 352 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 BSDC1Q9NW68 430 aaPredicted RBP14.67□□□□□ -0.06
SKP2-209ENST00000620197 PCDHA6Q9UN73 950 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 PCDHA8Q9Y5H6 950 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 LAD1O00515 517 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 MYBL2P10244 700 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 MCM7P33993 719 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 IL17RBQ9NRM6 502 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 CCDC87Q9NVE4 849 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 MCM3P25205 808 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 GYG1P46976 350 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 CCNI2Q6ZMN8 369 aaPredicted RBP14.67□□□□□ -0.06
SKP2-209ENST00000620197 C3orf67Q6ZVT6 689 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 CREG2Q8IUH2 290 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 MMGT1Q8N4V1 131 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 TMEM60Q9H2L4 133 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 CUEDC2Q9H467 287 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 AGPAT5Q9NUQ2 364 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 TFR2Q9UP52 801 aa14.67□□□□□ -0.06
SKP2-209ENST00000620197 LUC7L2Q9Y383 392 aaKnown RBP14.67□□□□□ -0.06
SKP2-209ENST00000620197 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 CALML3P27482 149 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
SKP2-209ENST00000620197 EHBP1Q8NDI1 1231 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 NUP58Q9BVL2 599 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 FAM204AQ9H8W3 233 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 MAD2L2Q9UI95 211 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 RNF40O75150 1001 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 TNFRSF8P28908 595 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 ZBED6P86452 979 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 C7orf25Q9BPX7 421 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 ATP8A2Q9NTI2 1148 aa14.66□□□□□ -0.06
SKP2-209ENST00000620197 NKRFO15226 690 aaKnown RBP eCLIP14.65□□□□□ -0.06
SKP2-209ENST00000620197 CPP00450 1065 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 CRKLP46109 303 aaKnown RBP14.65□□□□□ -0.06
SKP2-209ENST00000620197 KRT83P78385 493 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 GRM4Q14833 912 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 ANKRD20A12PQ8NF67 263 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 NHEJ1Q9H9Q4 299 aaPredicted RBP14.65□□□□□ -0.06
SKP2-209ENST00000620197 GUCA1BQ9UMX6 200 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 USP17L12C9JPN9 530 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 USP17L21D6R901 530 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 ENC1O14682 589 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 RGL2O15211 777 aa14.65□□□□□ -0.06
SKP2-209ENST00000620197 SRGAP2O75044 1071 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms