RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 APBA1Q02410 837 aa15.82■□□□□ 0.12
PTPN9-206ENST00000618819 HADHQ16836 314 aaKnown RBP15.82■□□□□ 0.12
PTPN9-206ENST00000618819 CDKL2Q92772 493 aa15.82■□□□□ 0.12
PTPN9-206ENST00000618819 PGBD1Q96JS3 809 aa15.82■□□□□ 0.12
PTPN9-206ENST00000618819 DACH2Q96NX9 599 aa15.82■□□□□ 0.12
PTPN9-206ENST00000618819 TCP1P17987 556 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 YARSP54577 528 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 HDLBPQ00341 1268 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 EXOC5O00471 708 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 SLC4A1P02730 911 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 KCNA4P22459 653 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ZNF827Q17R98 1081 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 FBXL13Q8NEE6 735 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ABCF3Q9NUQ8 709 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 NOP53Q9NZM5 478 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ESRRAP11474 423 aaPredicted RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 LLGL1Q15334 1064 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 CDAN1Q8IWY9 1227 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 LDHBP07195 334 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 XRCC5P13010 732 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 MRPS15P82914 257 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 GOLGA8QA0A0J9YX86 632 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 GOLGA8OA6NCC3 632 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 GOLGA8NF8WBI6 632 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 CDC26Q8NHZ8 85 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 STRIP2Q9ULQ0 834 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 SYCE1LA8MT33 242 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 NOP56O00567 594 aaKnown RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 PRDM1O75626 825 aa15.81■□□□□ 0.12
PTPN9-206ENST00000618819 ACTR5Q9H9F9 607 aaPredicted RBP15.81■□□□□ 0.12
PTPN9-206ENST00000618819 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 DCTPP1Q9H773 170 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 CXCR5P32302 372 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 IQCB1Q15051 598 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 RAB44Q7Z6P3 723 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 CAPN9O14815 690 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 PLTPP55058 493 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 NOD1Q9Y239 953 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 RABGGTAQ92696 567 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 FBXO2Q9UK22 296 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 ACTN3Q08043 901 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 LLPHQ9BRT6 129 aaKnown RBP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 SPAG7O75391 227 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 TRIM60Q495X7 471 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 ICE2Q659A1 982 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 NIP7Q9Y221 180 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPN9-206ENST00000618819 INPP5FQ9Y2H2 1132 aa15.8■□□□□ 0.12
PTPN9-206ENST00000618819 HEXIM1O94992 359 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 ATG16L1Q676U5 607 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 TPH2Q8IWU9 490 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 NOVA2Q9UNW9 492 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 IL16Q14005 1332 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 E9PMD0 336 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 PDE6CP51160 858 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 ENOX1Q8TC92 643 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 KRT40Q6A162 431 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 KSR2Q6VAB6 950 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 NR1H4Q96RI1 486 aaPredicted RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 SMYD3Q9H7B4 428 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 PPP2R5EQ16537 467 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 ARHGEF18Q6ZSZ5 1173 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 ARMC9Q7Z3E5 817 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 RFX6Q8HWS3 928 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 MAGOHBQ96A72 148 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 MESDQ14696 234 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 MAP7D3Q8IWC1 876 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 SUPT3HO75486 399 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 SLFN14P0C7P3 912 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 PFKFB1P16118 471 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 ZC3H12BQ5HYM0 836 aaKnown RBP15.79■□□□□ 0.12
PTPN9-206ENST00000618819 FAM227BQ96M60 508 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 CCDC90BQ9GZT6 254 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 FANCLQ9NW38 375 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 VPS54Q9P1Q0 977 aa15.79■□□□□ 0.12
PTPN9-206ENST00000618819 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 EPHB4P54760 987 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
PTPN9-206ENST00000618819 ADCY7P51828 1080 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
PTPN9-206ENST00000618819 ANGEL1Q9UNK9 670 aaKnown RBP15.78■□□□□ 0.12
PTPN9-206ENST00000618819 SORBS3O60504 671 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 NONOQ15233 471 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPN9-206ENST00000618819 NLRP3Q96P20 1036 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 ANAPC5Q9UJX4 755 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 DDIT3P35638 169 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 UBE3AQ05086 875 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 BBOF1Q8ND07 529 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 PLCG2P16885 1265 aa15.78■□□□□ 0.12
PTPN9-206ENST00000618819 LMNB1P20700 586 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms