RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SIAH1Q8IUQ4 282 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 RPAP2Q8IXW5 612 aaPredicted RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 CCDC155Q8N6L0 562 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 ATG4CQ96DT6 458 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 UPF3BQ9BZI7 483 aaKnown RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 UBE2ZQ9H832 354 aaPredicted RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 POLR3EQ9NVU0 708 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 MCM3APO60318 1980 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 BAZ2AQ9UIF9 1905 aaKnown RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 CXCL10P02778 98 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 TAL1P17542 331 aaPredicted RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 IGFBP4P22692 258 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 TIGD5Q53EQ6 642 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 CCDC158Q5M9N0 1113 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 PRAMEF19Q5SWL8 479 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 IQSEC1Q6DN90 963 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 NFRKBQ6P4R8 1299 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 HERC6Q8IVU3 1022 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 SSH1Q8WYL5 1049 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 FBXL18Q96ME1 805 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 POP1Q99575 1024 aaKnown RBP5.57□□□□□ -1.52
SNCA-213ENST00000618500 VTA1Q9NP79 307 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 CTNNA3Q9UI47 895 aa5.57□□□□□ -1.52
SNCA-213ENST00000618500 ASTN1O14525 1302 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 GRIN2DO15399 1336 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 KIAA1217Q5T5P2 1943 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 MYADML2A6NDP7 307 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 ASB14A6NK59 587 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 NKRFO15226 690 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNCA-213ENST00000618500 STAT3P40763 770 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 TFF2Q03403 129 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 TTF1Q15361 905 aaPredicted RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 TNNI3KQ59H18 835 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 KIAA1755Q5JYT7 1200 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 C16orf86Q6ZW13 317 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 MIER1Q8N108 512 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 GJD3Q8N144 294 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 KHSRPQ92945 711 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNCA-213ENST00000618500 LMAN2LQ9H0V9 348 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 FPGT-TNNI3KV9GXZ4 949 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 EPOPA6NHQ4 379 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 ITGA7Q13683 1181 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 SEPT2Q15019 361 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 TTC39AQ5SRH9 613 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 WDR78Q5VTH9 848 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 ADHFE1Q8IWW8 467 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 FAM133AQ8N9E0 248 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 CAGE1Q8TC20 777 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 PIH1D3Q9NQM4 214 aaKnown RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 ZNF536O15090 1300 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 IGKV6D-41A0A0C4DH26 115 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 KIF28PB7ZC32 967 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 ADCY6O43306 1168 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 B4GALT4O60513 344 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 FLOT1O75955 427 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 CYP2C18P33260 490 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 USP5P45974 858 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 DDX10Q13206 875 aaKnown RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 RAB3GAP1Q15042 981 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 CCDC85BQ15834 202 aaPredicted RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 GMCL1P1Q8NEA9 526 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 KANSL2Q9H9L4 492 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 NYAP2Q9P242 653 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 PNMA2Q9UL42 364 aa5.56□□□□□ -1.52
SNCA-213ENST00000618500 PA2G4Q9UQ80 394 aaKnown RBP5.56□□□□□ -1.52
SNCA-213ENST00000618500 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 CYP7A1P22680 504 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 ZP2Q05996 745 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 TBC1D9Q6ZT07 1266 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 ARMCX2Q7L311 632 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 AFAP1L1Q8TED9 768 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 MKL1Q969V6 931 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 PABPC5Q96DU9 382 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 SLC38A10Q9HBR0 1119 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 CA3P07451 260 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 ACRP10323 421 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 CD44P16070 742 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 HTRA4P83105 476 aaPredicted RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 ICA1Q05084 483 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 SLFN5Q08AF3 891 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 BFSP2Q13515 415 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 FSCN1Q16658 493 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 CCDC144BQ3MJ40 725 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 PPP4R3BQ5MIZ7 849 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 GORABQ5T7V8 394 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 ANO1Q5XXA6 986 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 CNKSR3Q6P9H4 555 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 PI16Q6UXB8 463 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 PRSS33Q8NF86 280 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 SSH3Q8TE77 659 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 MRPL38Q96DV4 380 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
SNCA-213ENST00000618500 ALG13Q9NP73 1137 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms