RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 AGBL1Q96MI9 1066 aa26.01■■□□□ 1.75
SYNGR3-206ENST00000618464 PRR12Q9ULL5 1215 aa26.01■■□□□ 1.75
SYNGR3-206ENST00000618464 FRMPD2Q68DX3 1309 aaPredicted RBP26■■□□□ 1.75
SYNGR3-206ENST00000618464 DNAJC25-GNG10A0A024R161 153 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 PLA2G6O60733 806 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 TTBK2Q6IQ55 1244 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 CHST13Q8NET6 341 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 ESR2Q92731 530 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 ZKSCAN3Q9BRR0 538 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 DSCC1Q9BVC3 393 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 FBXO40Q9UH90 709 aa26■■□□□ 1.75
SYNGR3-206ENST00000618464 ZNF536O15090 1300 aa25.99■■□□□ 1.75
SYNGR3-206ENST00000618464 DNM1LO00429 736 aa25.99■■□□□ 1.75
SYNGR3-206ENST00000618464 SLC16A2P36021 539 aa25.99■■□□□ 1.75
SYNGR3-206ENST00000618464 UBE2OQ9C0C9 1292 aaKnown RBP25.99■■□□□ 1.75
SYNGR3-206ENST00000618464 GPCPD1Q9NPB8 672 aa25.99■■□□□ 1.75
SYNGR3-206ENST00000618464 ATN1P54259 1190 aaPredicted RBP25.98■■□□□ 1.75
SYNGR3-206ENST00000618464 ARRDC4Q8NCT1 418 aa25.98■■□□□ 1.75
SYNGR3-206ENST00000618464 RNF146Q9NTX7 359 aa25.98■■□□□ 1.75
SYNGR3-206ENST00000618464 ALAS1P13196 640 aa25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 IMMTQ16891 758 aaKnown RBP25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 TDHQ8IZJ6 230 aa25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 ACAD9Q9H845 621 aa25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 NRBP1Q9UHY1 535 aa25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 CNPY2Q9Y2B0 182 aa25.97■■□□□ 1.75
SYNGR3-206ENST00000618464 DNAH12Q6ZR08 3092 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 B4E1Z4 1266 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 KBTBD13C9JR72 458 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 KDM4AO75164 1064 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 MDM2Q00987 491 aaPredicted RBP25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.96■■□□□ 1.752e-6■■■■□ 25.5
SYNGR3-206ENST00000618464 LENG1Q96BZ8 264 aaPredicted RBP25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 TTC14Q96N46 770 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 TRERF1Q96PN7 1200 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 CTNNA3Q9UI47 895 aa25.96■■□□□ 1.75
SYNGR3-206ENST00000618464 SNAI1O95863 264 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 ZNF865P0CJ78 1059 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 PDHBP11177 359 aa25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 LRIT3Q3SXY7 679 aa25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 SYDE2Q5VT97 1194 aa25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 FGD4Q96M96 766 aa25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 CCPG1Q9ULG6 757 aa25.95■■□□□ 1.74
SYNGR3-206ENST00000618464 SYNGAP1Q96PV0 1343 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 SMCHD1A6NHR9 2005 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 RARBP10826 455 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 CNTN2Q02246 1040 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 LRRC41Q15345 812 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 MSL3Q8N5Y2 521 aaKnown RBP25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 A1CFQ9NQ94 594 aaKnown RBP25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 XPNPEP3Q9NQH7 507 aa25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 ZHX1Q9UKY1 873 aaPredicted RBP25.94■■□□□ 1.74
SYNGR3-206ENST00000618464 POTEB2H3BUK9 544 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 CHMLP26374 656 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 TKFCQ3LXA3 575 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 MUM1L1Q5H9M0 696 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 MAMDC4Q6UXC1 1216 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 BTNL9Q6UXG8 535 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 ZNF467Q7Z7K2 595 aaPredicted RBP25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 IQCA1Q86XH1 822 aa25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 RANBP17Q9H2T7 1088 aaKnown RBP25.93■■□□□ 1.74
SYNGR3-206ENST00000618464 RAD50Q92878 1312 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 PGK1P00558 417 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 AKR1A1P14550 325 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 RTP1P59025 263 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 ZNF543Q08ER8 600 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 RUFY2Q8WXA3 655 aa25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.92■■□□□ 1.74
SYNGR3-206ENST00000618464 ICAM1P05362 532 aa25.91■■□□□ 1.74
SYNGR3-206ENST00000618464 ADCYAP1R1P41586 468 aa25.91■■□□□ 1.74
SYNGR3-206ENST00000618464 ARMCX2Q7L311 632 aa25.91■■□□□ 1.74
SYNGR3-206ENST00000618464 FERMT2Q96AC1 680 aa25.91■■□□□ 1.74
SYNGR3-206ENST00000618464 ZSWIM5Q9P217 1185 aa25.91■■□□□ 1.74
SYNGR3-206ENST00000618464 MCM3APO60318 1980 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 GOLGA8HP0CJ92 632 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 PTH1RQ03431 593 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 GPR153Q6NV75 609 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 NSMFQ6X4W1 530 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 SLC39A5Q6ZMH5 540 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 Q7L0L9 218 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 DGKHQ86XP1 1220 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 FAM133AQ8N9E0 248 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 ZSCAN10Q96SZ4 725 aaPredicted RBP25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 KRT23Q9C075 422 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 FAM184BQ9ULE4 1060 aa25.9■■□□□ 1.74
SYNGR3-206ENST00000618464 SOWAHBA6NEL2 793 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 SNHG28P0DPA3 235 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 ACVR2BQ13705 512 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 CCDC178Q5BJE1 867 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 CCDC144CPQ8IYA2 1237 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 DEFB123Q8N688 67 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 PNMA1Q8ND90 353 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 KAT14Q9H8E8 782 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 CNNM2Q9H8M5 875 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 ATP11BQ9Y2G3 1177 aa25.89■■□□□ 1.74
SYNGR3-206ENST00000618464 NT5C2P49902 561 aa25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 RNF180Q86T96 592 aa25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 ENAHQ8N8S7 591 aaPredicted RBP25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 CPVLQ9H3G5 476 aa25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 CYP39A1Q9NYL5 469 aa25.88■■□□□ 1.73
SYNGR3-206ENST00000618464 DDX49Q9Y6V7 483 aaKnown RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms