RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 GYPCP04921 128 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 TCERG1LQ5VWI1 586 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 CWF19L1Q69YN2 538 aaKnown RBP13.56□□□□□ -0.24
MATR3-227ENST00000618441 TRAPPC11Q7Z392 1133 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 TRIML1Q8N9V2 468 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 ELAC2Q9BQ52 826 aaKnown RBP13.56□□□□□ -0.24
MATR3-227ENST00000618441 DPPA5A6NC42 116 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 A8MUI8 341 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 PAK2Q13177 524 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 PPP1R15BQ5SWA1 713 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 ABTB1Q969K4 478 aaPredicted RBP13.56□□□□□ -0.24
MATR3-227ENST00000618441 HOMER3Q9NSC5 361 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 LUC7L2Q9Y383 392 aaKnown RBP13.56□□□□□ -0.24
MATR3-227ENST00000618441 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
MATR3-227ENST00000618441 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
MATR3-227ENST00000618441 FAM170AA1A519 330 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 SPDYE3A6NKU9 549 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 SMNDC1O75940 238 aaKnown RBP eCLIP13.55□□□□□ -0.249e-7■□□□□ 11.3
MATR3-227ENST00000618441 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 NR1I3Q14994 352 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 SPA17Q15506 151 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 ALS2CLQ60I27 953 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 PHKBQ93100 1093 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 ERICH2A1L162 156 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 RASSF10A6NK89 507 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 ABL2P42684 1182 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 PLCB4Q15147 1175 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 AKNAD1Q5T1N1 836 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 ERICH1Q86X53 443 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 FAM81AQ8TBF8 368 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 ALS2CR12Q96Q35 445 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 ABHD10Q9NUJ1 306 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 FERP16591 822 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 TRIM21P19474 475 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 KRT71Q3SY84 523 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 CCDC197Q8NCU1 140 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
MATR3-227ENST00000618441 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 NAT2P11245 290 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 CTNNA1P35221 906 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
MATR3-227ENST00000618441 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 MS4A14Q96JA4 679 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 ATP6V1G3Q96LB4 118 aa13.55□□□□□ -0.24
MATR3-227ENST00000618441 OATP04181 439 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 LINGO3P0C6S8 592 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 SKOR1P84550 965 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 ACBD5Q5T8D3 534 aaPredicted RBP13.54□□□□□ -0.24
MATR3-227ENST00000618441 TRIM42Q8IWZ5 723 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 AGLP35573 1532 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 B4DLN1 442 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 NAT1P18440 290 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 ATP11AP98196 1134 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 STOX1Q6ZVD7 989 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 FNBP4Q8N3X1 1017 aaPredicted RBP13.54□□□□□ -0.24
MATR3-227ENST00000618441 AENQ8WTP8 325 aaKnown RBP13.54□□□□□ -0.24
MATR3-227ENST00000618441 TRIM31Q9BZY9 425 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 RABL2BQ9UNT1 228 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 CPS1P31327 1500 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 BUB1O43683 1085 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 AHCYL1O43865 530 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 AMPD2Q01433 879 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
MATR3-227ENST00000618441 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 TMEM154Q6P9G4 183 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 MGARPQ8TDB4 240 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 POLR3EQ9NVU0 708 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 SAMD15Q9P1V8 674 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
MATR3-227ENST00000618441 MYOM1P52179 1685 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 ZNF233A6NK53 670 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 HIP1RO75146 1068 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms