RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 LBX2Q6XYB7 198 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 HEATR3Q7Z4Q2 680 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 FERMT3Q86UX7 667 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
PDPN-211ENST00000617617 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
PDPN-211ENST00000617617 hCG_1642624A0A1W2PR95 340 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 IRF6O14896 467 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 NAPAP54920 295 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 MAP1SQ66K74 1059 aaPredicted RBP13.47□□□□□ -0.25
PDPN-211ENST00000617617 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 PCDHA6Q9UN73 950 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 SLC45A1Q9Y2W3 748 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 PCDHA8Q9Y5H6 950 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 ABCB11O95342 1321 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 DLK2Q6UY11 383 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
PDPN-211ENST00000617617 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
PDPN-211ENST00000617617 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
PDPN-211ENST00000617617 LCTP09848 1927 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 BMP15O95972 392 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 ICAM1P05362 532 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 ADCY7P51828 1080 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 MOGSQ13724 837 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 FOXD4L5Q5VV16 416 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 CCDC84Q86UT8 332 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 FOXD4L4Q8WXT5 416 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 FZD1Q9UP38 647 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 UTRNP46939 3433 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 SMCO2A6NFE2 343 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 DSG3P32926 999 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 USP17L24Q0WX57 530 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 REPS2Q8NFH8 660 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.25
PDPN-211ENST00000617617 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
PDPN-211ENST00000617617 ZNF536O15090 1300 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 PPP6R2O75170 966 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 MRPL12P52815 198 aaKnown RBP13.45□□□□□ -0.26
PDPN-211ENST00000617617 FOSBP53539 338 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 PTPAQ15257 358 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 CUL5Q93034 780 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
PDPN-211ENST00000617617 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
PDPN-211ENST00000617617 NR5A1Q13285 461 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDPN-211ENST00000617617 LINC00301Q8NCQ3 95 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 TRAF5O00463 557 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 UBE2HP62256 183 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
PDPN-211ENST00000617617 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 FASTKD5Q7L8L6 764 aaKnown RBP13.45□□□□□ -0.26
PDPN-211ENST00000617617 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
PDPN-211ENST00000617617 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 MBD3O95983 291 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 ZBTB48P10074 688 aaPredicted RBP13.44□□□□□ -0.26
PDPN-211ENST00000617617 HMGCS2P54868 508 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 COG2Q14746 738 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 TKFCQ3LXA3 575 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 REXO1Q8N1G1 1221 aaKnown RBP13.44□□□□□ -0.26
PDPN-211ENST00000617617 C2orf69Q8N8R5 385 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 CLMNQ96JQ2 1002 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 CEP131Q9UPN4 1083 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 MB21D1Q8N884 522 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 COA7Q96BR5 231 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 OPTNQ96CV9 577 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
PDPN-211ENST00000617617 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
PDPN-211ENST00000617617 VWA5AO00534 786 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 OPLAHO14841 1288 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
PDPN-211ENST00000617617 ZYXQ15942 572 aaKnown RBP13.43□□□□□ -0.26
PDPN-211ENST00000617617 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
PDPN-211ENST00000617617 FAM173BQ6P4H8 233 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms