RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 ARNTL2Q8WYA1 636 aa16.02■□□□□ 0.16
PHF20-216ENST00000617560 EAF2Q96CJ1 260 aaPredicted RBP16.02■□□□□ 0.16
PHF20-216ENST00000617560 SNX27Q96L92 541 aa16.02■□□□□ 0.16
PHF20-216ENST00000617560 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
PHF20-216ENST00000617560 DCP1AQ9NPI6 582 aaPredicted RBP16.02■□□□□ 0.16
PHF20-216ENST00000617560 ASTN1O14525 1302 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
PHF20-216ENST00000617560 B4GALT4O60513 344 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 SURF6O75683 361 aaKnown RBP16.01■□□□□ 0.15
PHF20-216ENST00000617560 BCAR3O75815 825 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 POLA2Q14181 598 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 ARMCX2Q7L311 632 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 SPRED2Q7Z698 418 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 ABHD16BQ9H3Z7 469 aa16.01■□□□□ 0.15
PHF20-216ENST00000617560 CYP2D7A0A087X1C5 515 aa16■□□□□ 0.15
PHF20-216ENST00000617560 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
PHF20-216ENST00000617560 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
PHF20-216ENST00000617560 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
PHF20-216ENST00000617560 LCORLQ8N3X6 602 aa16■□□□□ 0.15
PHF20-216ENST00000617560 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
PHF20-216ENST00000617560 UIMC1Q96RL1 719 aa16■□□□□ 0.15
PHF20-216ENST00000617560 TEX13BQ9BXU2 312 aa16■□□□□ 0.15
PHF20-216ENST00000617560 SWAP70Q9UH65 585 aa16■□□□□ 0.15
PHF20-216ENST00000617560 COL4A4P53420 1690 aaPredicted RBP15.99■□□□□ 0.15
PHF20-216ENST00000617560 PDE6AP16499 860 aa15.99■□□□□ 0.15
PHF20-216ENST00000617560 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
PHF20-216ENST00000617560 PSMC6P62333 389 aa15.99■□□□□ 0.15
PHF20-216ENST00000617560 ZNF467Q7Z7K2 595 aaPredicted RBP15.99■□□□□ 0.15
PHF20-216ENST00000617560 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
PHF20-216ENST00000617560 CPXCR1Q8N123 301 aa15.99■□□□□ 0.15
PHF20-216ENST00000617560 KATNBL1Q9H079 304 aa15.99■□□□□ 0.15
PHF20-216ENST00000617560 PRKAB2O43741 272 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 CDK8P49336 464 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 TAP1Q03518 808 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 GRB10Q13322 594 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 SLC9C2Q5TAH2 1124 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 CCDC144CPQ8IYA2 1237 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 SSH3Q8TE77 659 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 ARHGAP45Q92619 1136 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 CLUAP1Q96AJ1 413 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
PHF20-216ENST00000617560 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
PHF20-216ENST00000617560 TET1Q8NFU7 2136 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 CYP2C9P11712 490 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 NKX3-2P78367 333 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 NHLH1Q02575 133 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 TNFAIP2Q03169 654 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 TLK2Q86UE8 772 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 ANKRD35Q8N283 1001 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 ARMT1Q9H993 441 aa15.97■□□□□ 0.15
PHF20-216ENST00000617560 RAVER2Q9HCJ3 691 aaKnown RBP15.97■□□□□ 0.15
PHF20-216ENST00000617560 ZNF532Q9HCE3 1301 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 LPXNO60711 386 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 CT47B1P0C2W7 299 aaPredicted RBP15.96■□□□□ 0.15
PHF20-216ENST00000617560 TRIM27P14373 513 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 ATP8B2P98198 1209 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 FSCN1Q16658 493 aaKnown RBP15.96■□□□□ 0.15
PHF20-216ENST00000617560 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
PHF20-216ENST00000617560 GNEQ9Y223 722 aaKnown RBP15.96■□□□□ 0.15
PHF20-216ENST00000617560 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
PHF20-216ENST00000617560 DYNC1LI2O43237 492 aaPredicted RBP15.95■□□□□ 0.14
PHF20-216ENST00000617560 CABYRO75952 493 aa15.95■□□□□ 0.14
PHF20-216ENST00000617560 TMEM63BQ5T3F8 832 aa15.95■□□□□ 0.14
PHF20-216ENST00000617560 TMED8Q6PL24 325 aaPredicted RBP15.95■□□□□ 0.14
PHF20-216ENST00000617560 GDPD5Q8WTR4 605 aa15.95■□□□□ 0.14
PHF20-216ENST00000617560 TRMT13Q9NUP7 481 aaKnown RBP15.95■□□□□ 0.14
PHF20-216ENST00000617560 PTPRSQ13332 1948 aa15.95■□□□□ 0.14
PHF20-216ENST00000617560 C12orf60Q5U649 245 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 C16orf86Q6ZW13 317 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 GJD3Q8N144 294 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 ALDH8A1Q9H2A2 487 aaPredicted RBP15.94■□□□□ 0.14
PHF20-216ENST00000617560 PDGFCQ9NRA1 345 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 HOMER2Q9NSB8 354 aa15.94■□□□□ 0.14
PHF20-216ENST00000617560 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
PHF20-216ENST00000617560 TRIOO75962 3097 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 USP17L12C9JPN9 530 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 USP17L21D6R901 530 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 SMPD1P17405 629 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
PHF20-216ENST00000617560 AACSQ86V21 672 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 PRPF38AQ8NAV1 312 aaKnown RBP15.93■□□□□ 0.14
PHF20-216ENST00000617560 PPP1R13LQ8WUF5 828 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 FRAT1Q92837 279 aaPredicted RBP15.93■□□□□ 0.14
PHF20-216ENST00000617560 KIFC2Q96AC6 838 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 FBXL18Q96ME1 805 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 SLC9A7Q96T83 725 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.93■□□□□ 0.14
PHF20-216ENST00000617560 CTDP1Q9Y5B0 961 aaPredicted RBP15.93■□□□□ 0.14
PHF20-216ENST00000617560 ZNF318Q5VUA4 2279 aa15.93■□□□□ 0.14
PHF20-216ENST00000617560 GREB1LQ9C091 1923 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms