RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SNAI1O95863 264 aaPredicted RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 C6orf222P0C671 652 aaPredicted RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 COPB2P35606 906 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ADD2P35612 726 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 MRPS5P82675 430 aaKnown RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ADGRE1Q14246 886 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 SNRNP48Q6IEG0 339 aaKnown RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 ZNF365Q70YC5 407 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 TMEM199Q8N511 208 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 REPS2Q8NFH8 660 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 GPATCH3Q96I76 525 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 CCDC17Q96LX7 622 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ASB2Q96Q27 587 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 UHRF1Q96T88 793 aaPredicted RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 NUP88Q99567 741 aaPredicted RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 MSRAQ9UJ68 235 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 ZNF214Q9UL59 606 aaPredicted RBP10.2□□□□□ -0.78
GPC6-202ENST00000617456 ADAMTS5Q9UNA0 930 aa10.2□□□□□ -0.78
GPC6-202ENST00000617456 MROH7Q68CQ1 1323 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 BDP1A6H8Y1 2624 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 USP17L21D6R901 530 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 ASGR1P07306 291 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 MCCP23508 829 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 CYP2C18P33260 490 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 AKNAD1Q5T1N1 836 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 CCSAPQ6IQ19 270 aaPredicted RBP10.19□□□□□ -0.78
GPC6-202ENST00000617456 GIMAP6Q6P9H5 292 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 STK11IPQ8N1F8 1099 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 SPC25Q9HBM1 224 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 ECHDC1Q9NTX5 307 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 RIPK3Q9Y572 518 aa10.19□□□□□ -0.78
GPC6-202ENST00000617456 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
GPC6-202ENST00000617456 COL11A1P12107 1806 aaPredicted RBP10.19□□□□□ -0.78
GPC6-202ENST00000617456 ELP1O95163 1332 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 SYNGAP1Q96PV0 1343 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 ARVCFO00192 962 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 DUSP11O75319 330 aaKnown RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 CHGBP05060 677 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 ZFYP08048 801 aaPredicted RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 CDK7P50613 346 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 ACVR2BQ13705 512 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 C12orf60Q5U649 245 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 RASIP1Q5U651 963 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 PSRC1Q6PGN9 363 aaPredicted RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 C16orf86Q6ZW13 317 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 NOL8Q76FK4 1167 aaKnown RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 CPXCR1Q8N123 301 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 MSL3Q8N5Y2 521 aaKnown RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 PCSK9Q8NBP7 692 aaKnown RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 SLF1Q9BQI6 1058 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 TEX13BQ9BXU2 312 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 BOLA2Q9H3K6 86 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.18□□□□□ -0.78
GPC6-202ENST00000617456 SLC4A4Q9Y6R1 1079 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 PLXNA1Q9UIW2 1896 aa10.18□□□□□ -0.78
GPC6-202ENST00000617456 TTC41PQ6P2S7 1318 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 ADCY6O43306 1168 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 CST5P28325 142 aaPredicted RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 BEX3Q00994 111 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 RAB30Q15771 203 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 C20orf194Q5TEA3 1177 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 MAMDC4Q6UXC1 1216 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 KIFC2Q96AC6 838 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 NECAB3Q96P71 396 aaPredicted RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 SLC28A3Q9HAS3 691 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 IL23AQ9NPF7 189 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 CXXC1Q9P0U4 656 aaPredicted RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 YBX2Q9Y2T7 364 aaKnown RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 CHD9Q3L8U1 2897 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 MYH8P13535 1937 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 BAZ2AQ9UIF9 1905 aaKnown RBP10.17□□□□□ -0.78
GPC6-202ENST00000617456 PARP14Q460N5 1801 aa10.17□□□□□ -0.78
GPC6-202ENST00000617456 DNAJC25-GNG10A0A024R161 153 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 CLGNO14967 610 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 ERC2O15083 957 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 ZBED4O75132 1171 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 NDUFB10O96000 172 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 FGBP02675 491 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 PTMAP06454 111 aaKnown RBP10.16□□□□□ -0.78
GPC6-202ENST00000617456 GNAT2P19087 354 aa10.16□□□□□ -0.78
GPC6-202ENST00000617456 PLA2G5P39877 138 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms