RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 NECAB2Q7Z6G3 386 aa26.01■■□□□ 1.75
CBWD3-212ENST00000616550 DPF3Q92784 378 aa26.01■■□□□ 1.75
CBWD3-212ENST00000616550 MAP4K1Q92918 833 aa26.01■■□□□ 1.75
CBWD3-212ENST00000616550 PAWRQ96IZ0 340 aaKnown RBP26.01■■□□□ 1.75
CBWD3-212ENST00000616550 ZNF536O15090 1300 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 TNKSO95271 1327 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 ZNF543Q08ER8 600 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26■■□□□ 1.75
CBWD3-212ENST00000616550 ENAHQ8N8S7 591 aaPredicted RBP26■■□□□ 1.75
CBWD3-212ENST00000616550 PNMA1Q8ND90 353 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 TRPV1Q8NER1 839 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 ACAD9Q9H845 621 aa26■■□□□ 1.75
CBWD3-212ENST00000616550 DDX20Q9UHI6 824 aaKnown RBP26■■□□□ 1.75
CBWD3-212ENST00000616550 SNHG28P0DPA3 235 aa25.99■■□□□ 1.75
CBWD3-212ENST00000616550 GPATCH4Q5T3I0 446 aaKnown RBP25.99■■□□□ 1.75
CBWD3-212ENST00000616550 TRERF1Q96PN7 1200 aa25.99■■□□□ 1.75
CBWD3-212ENST00000616550 TINF2Q9BSI4 451 aa25.99■■□□□ 1.75
CBWD3-212ENST00000616550 ESYT1Q9BSJ8 1104 aa25.99■■□□□ 1.75
CBWD3-212ENST00000616550 DNAJC25-GNG10A0A024R161 153 aa25.98■■□□□ 1.75
CBWD3-212ENST00000616550 ALAS1P13196 640 aa25.98■■□□□ 1.75
CBWD3-212ENST00000616550 PRAMEF19Q5SWL8 479 aa25.98■■□□□ 1.75
CBWD3-212ENST00000616550 RALYLQ86SE5 291 aaKnown RBP25.98■■□□□ 1.75
CBWD3-212ENST00000616550 DIS3LQ8TF46 1054 aaKnown RBP25.98■■□□□ 1.75
CBWD3-212ENST00000616550 RANBP17Q9H2T7 1088 aaKnown RBP25.98■■□□□ 1.75
CBWD3-212ENST00000616550 RNF146Q9NTX7 359 aa25.98■■□□□ 1.75
CBWD3-212ENST00000616550 CCPG1Q9ULG6 757 aa25.98■■□□□ 1.75
CBWD3-212ENST00000616550 RBM8AQ9Y5S9 174 aaKnown RBP25.98■■□□□ 1.75
CBWD3-212ENST00000616550 IFIT1BQ5T764 474 aaKnown RBP25.97■■□□□ 1.75
CBWD3-212ENST00000616550 MSL3Q8N5Y2 521 aaKnown RBP25.97■■□□□ 1.75
CBWD3-212ENST00000616550 NCOA7Q8NI08 942 aa25.97■■□□□ 1.75
CBWD3-212ENST00000616550 NRBP1Q9UHY1 535 aa25.97■■□□□ 1.75
CBWD3-212ENST00000616550 E7EWF7 191 aa25.96■■□□□ 1.75
CBWD3-212ENST00000616550 SEPT4O43236 478 aa25.96■■□□□ 1.75
CBWD3-212ENST00000616550 ICAM1P05362 532 aa25.96■■□□□ 1.75
CBWD3-212ENST00000616550 CASC1Q6TDU7 716 aa25.96■■□□□ 1.75
CBWD3-212ENST00000616550 CYB5R4Q7L1T6 521 aa25.96■■□□□ 1.75
CBWD3-212ENST00000616550 GOLGA8HP0CJ92 632 aa25.95■■□□□ 1.74
CBWD3-212ENST00000616550 MNX1P50219 401 aaPredicted RBP25.95■■□□□ 1.74
CBWD3-212ENST00000616550 LSG1Q9H089 658 aaKnown RBP25.95■■□□□ 1.74
CBWD3-212ENST00000616550 C11orf49Q9H6J7 331 aa25.95■■□□□ 1.74
CBWD3-212ENST00000616550 PNMA2Q9UL42 364 aa25.95■■□□□ 1.74
CBWD3-212ENST00000616550 CNPY2Q9Y2B0 182 aa25.95■■□□□ 1.74
CBWD3-212ENST00000616550 FRMPD3Q5JV73 1810 aa25.95■■□□□ 1.74
CBWD3-212ENST00000616550 SMCHD1A6NHR9 2005 aa25.94■■□□□ 1.74
CBWD3-212ENST00000616550 ERICH2A1L162 156 aa25.94■■□□□ 1.74
CBWD3-212ENST00000616550 ASPRV1Q53RT3 343 aa25.94■■□□□ 1.74
CBWD3-212ENST00000616550 ZNF467Q7Z7K2 595 aaPredicted RBP25.94■■□□□ 1.74
CBWD3-212ENST00000616550 PFASO15067 1338 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 SYNGAP1Q96PV0 1343 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 POTEB2H3BUK9 544 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 PARP1P09874 1014 aaKnown RBP25.93■■□□□ 1.74
CBWD3-212ENST00000616550 SART3Q15020 963 aaKnown RBP25.93■■□□□ 1.74
CBWD3-212ENST00000616550 SEC23AQ15436 765 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 MAMDC4Q6UXC1 1216 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 ANO2Q9NQ90 1003 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 A1CFQ9NQ94 594 aaKnown RBP25.93■■□□□ 1.74
CBWD3-212ENST00000616550 TAF6LQ9Y6J9 622 aa25.93■■□□□ 1.74
CBWD3-212ENST00000616550 IFIT3O14879 490 aaKnown RBP25.92■■□□□ 1.74
CBWD3-212ENST00000616550 CENPBP07199 599 aaPredicted RBP25.92■■□□□ 1.74
CBWD3-212ENST00000616550 MUM1L1Q5H9M0 696 aa25.92■■□□□ 1.74
CBWD3-212ENST00000616550 UBA5Q9GZZ9 404 aa25.92■■□□□ 1.74
CBWD3-212ENST00000616550 NR2E3Q9Y5X4 410 aa25.92■■□□□ 1.74
CBWD3-212ENST00000616550 EVI5O60447 810 aa25.91■■□□□ 1.74
CBWD3-212ENST00000616550 CDC45O75419 566 aa25.91■■□□□ 1.74
CBWD3-212ENST00000616550 ANO1Q5XXA6 986 aa25.91■■□□□ 1.74
CBWD3-212ENST00000616550 STOX1Q6ZVD7 989 aa25.91■■□□□ 1.74
CBWD3-212ENST00000616550 ARRDC4Q8NCT1 418 aa25.91■■□□□ 1.74
CBWD3-212ENST00000616550 SNAI1O95863 264 aaPredicted RBP25.9■■□□□ 1.74
CBWD3-212ENST00000616550 TAL1P17542 331 aaPredicted RBP25.9■■□□□ 1.74
CBWD3-212ENST00000616550 CNTN2Q02246 1040 aa25.9■■□□□ 1.74
CBWD3-212ENST00000616550 NSMFQ6X4W1 530 aa25.9■■□□□ 1.74
CBWD3-212ENST00000616550 FAM133AQ8N9E0 248 aa25.9■■□□□ 1.74
CBWD3-212ENST00000616550 CPVLQ9H3G5 476 aa25.9■■□□□ 1.74
CBWD3-212ENST00000616550 ZNF865P0CJ78 1059 aaPredicted RBP25.89■■□□□ 1.74
CBWD3-212ENST00000616550 WTAPQ15007 396 aa25.89■■□□□ 1.74
CBWD3-212ENST00000616550 CHST3Q7LGC8 479 aa25.89■■□□□ 1.74
CBWD3-212ENST00000616550 CYP39A1Q9NYL5 469 aa25.89■■□□□ 1.74
CBWD3-212ENST00000616550 MCM3APO60318 1980 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 H0YGN5 161 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 DNM1LO00429 736 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 DHX16O60231 1041 aaKnown RBP25.88■■□□□ 1.73
CBWD3-212ENST00000616550 RARBP10826 455 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 AKR1A1P14550 325 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 ADGRF4Q8IZF3 695 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 FGD4Q96M96 766 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.88■■□□□ 1.73
CBWD3-212ENST00000616550 WDR19Q8NEZ3 1342 aa25.88■■□□□ 1.73
CBWD3-212ENST00000616550 ASB14A6NK59 587 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 SLC27A2O14975 620 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 MYCNP04198 464 aaPredicted RBP25.87■■□□□ 1.73
CBWD3-212ENST00000616550 COL6A1P12109 1028 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 NECTIN1Q15223 517 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 TMEM67Q5HYA8 995 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 GJC2Q5T442 439 aaPredicted RBP25.87■■□□□ 1.73
CBWD3-212ENST00000616550 CREB3L3Q68CJ9 461 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 ARMCX2Q7L311 632 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 MB21D2Q8IYB1 491 aaPredicted RBP25.87■■□□□ 1.73
CBWD3-212ENST00000616550 SENP6Q9GZR1 1112 aaPredicted RBP25.87■■□□□ 1.73
CBWD3-212ENST00000616550 ABHD16BQ9H3Z7 469 aa25.87■■□□□ 1.73
CBWD3-212ENST00000616550 ZHX1Q9UKY1 873 aaPredicted RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms