RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 PIGSQ96S52 555 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
TARDBP-217ENST00000616545 PTPRFP10586 1907 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 CCL15-CCL14A0A0B4J2E2 113 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 VWA5AO00534 786 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 GNA11P29992 359 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 CCL15Q16663 113 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 BRMS1Q9HCU9 246 aa13.43□□□□□ -0.26
TARDBP-217ENST00000616545 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-217ENST00000616545 ICAM1P05362 532 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 COPB2P35606 906 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 NOGQ13253 232 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 DEFB115Q30KQ5 88 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 TKFCQ3LXA3 575 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 HEATR3Q7Z4Q2 680 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 ZMYND12Q9H0C1 365 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
TARDBP-217ENST00000616545 C6orf50Q9HD87 102 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
TARDBP-217ENST00000616545 ABCB11O95342 1321 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 STXBP3O00186 592 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 BRD1O95696 1058 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 MMP1P03956 469 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 GCLCP48506 637 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 MRPL12P52815 198 aaKnown RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 DGKZQ13574 1117 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 KRT40Q6A162 431 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 WWC2Q6AWC2 1192 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 DAGLBQ8NCG7 672 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 PHF20Q9BVI0 1012 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 ASCC2Q9H1I8 757 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 MAP3K20Q9NYL2 800 aaKnown RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 MRPL11Q9Y3B7 192 aaKnown RBP13.41□□□□□ -0.26
TARDBP-217ENST00000616545 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
TARDBP-217ENST00000616545 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
TARDBP-217ENST00000616545 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 PDHXO00330 501 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 ALDH1A1P00352 501 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 ZSCAN22P10073 491 aaPredicted RBP13.4□□□□□ -0.26
TARDBP-217ENST00000616545 TM4SF4P48230 202 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 NAPAP54920 295 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 NLRP5P59047 1200 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 HERVK_113P62684 666 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 BRAPQ7Z569 592 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
TARDBP-217ENST00000616545 TEX13BQ9BXU2 312 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
TARDBP-217ENST00000616545 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
TARDBP-217ENST00000616545 hCG_1642624A0A1W2PR95 340 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-217ENST00000616545 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 KRT2P35908 639 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 AIFM3Q96NN9 605 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
TARDBP-217ENST00000616545 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 MYH6P13533 1939 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 ZNF536O15090 1300 aa13.39□□□□□ -0.27
TARDBP-217ENST00000616545 SMCO2A6NFE2 343 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
TARDBP-217ENST00000616545 SLC25A27O95847 323 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.273e-10■□□□□ 10
TARDBP-217ENST00000616545 MAP2K2P36507 400 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 STAT3P40763 770 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 ADCY7P51828 1080 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
TARDBP-217ENST00000616545 ATL3Q6DD88 541 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 BLIDQ8IZY5 108 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
TARDBP-217ENST00000616545 CUL5Q93034 780 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 COA7Q96BR5 231 aa13.38□□□□□ -0.27
TARDBP-217ENST00000616545 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms