RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 EVCP57679 992 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 MRFAP1L1Q96HT8 127 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 USP27XA6NNY8 438 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 SH2B2O14492 632 aaPredicted RBP14.8□□□□□ -0.04
FOXN3-219ENST00000615335 NMT2O60551 498 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 FDPSP14324 419 aaKnown RBP14.8□□□□□ -0.04
FOXN3-219ENST00000615335 SHMT1P34896 483 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 NT5C2P49902 561 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 CCDC144BQ3MJ40 725 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 NFXL1Q6ZNB6 911 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 EFCAB13Q8IY85 973 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 CCDC144CPQ8IYA2 1237 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■■□ 20.3
FOXN3-219ENST00000615335 ADAM21Q9UKJ8 722 aa14.8□□□□□ -0.04
FOXN3-219ENST00000615335 TNKSO95271 1327 aa14.79□□□□□ -0.04
FOXN3-219ENST00000615335 WTAPQ15007 396 aa14.79□□□□□ -0.04
FOXN3-219ENST00000615335 USP50Q70EL3 339 aaPredicted RBP14.79□□□□□ -0.04
FOXN3-219ENST00000615335 RTEL1Q9NZ71 1219 aa14.79□□□□□ -0.04
FOXN3-219ENST00000615335 HERC5Q9UII4 1024 aaKnown RBP14.79□□□□□ -0.04
FOXN3-219ENST00000615335 MPHOSPH10O00566 681 aaKnown RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 PPP1R12AO14974 1030 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 USP8P40818 1118 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 EAPPQ56P03 285 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 DCPSQ96C86 337 aaKnown RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 MTA3Q9BTC8 594 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 LY9Q9HBG7 655 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 SENP2Q9HC62 589 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 PCDHA7Q9UN72 937 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 SCN4AP35499 1836 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 KIF3CO14782 793 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 MAP2K1Q02750 393 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 METTL16Q86W50 562 aaKnown RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 CEP57L1Q8IYX8 460 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 ENAHQ8N8S7 591 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-219ENST00000615335 FAM107BQ9H098 131 aa14.78□□□□□ -0.04
FOXN3-219ENST00000615335 KLF18A0A0U1RQI7 1052 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 CCDC69A6NI79 296 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 AKR1B1P15121 316 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 LIFRP42702 1097 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 IFIT1BQ5T764 474 aaKnown RBP14.77□□□□□ -0.04
FOXN3-219ENST00000615335 ADALQ6DHV7 355 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 DHX40Q8IX18 779 aaKnown RBP14.77□□□□□ -0.04
FOXN3-219ENST00000615335 TMTC2Q8N394 836 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 C8orf76Q96K31 380 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 TEPSINQ96N21 525 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 TAF1DQ9H5J8 278 aaPredicted RBP14.77□□□□□ -0.04
FOXN3-219ENST00000615335 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 PGAP2Q9UHJ9 254 aa14.77□□□□□ -0.04
FOXN3-219ENST00000615335 A0A1W2PQ27 194 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 A0A1W2PQ64 194 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 A0A1W2PQD8 194 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 CCDC189A1A4V9 331 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 POTECB2RU33 542 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 TBC1D8O95759 1140 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 LRCH2Q5VUJ6 765 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 PRAMEF18Q5VWM3 479 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 TATDN1Q6P1N9 297 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 FMR1NBQ8N0W7 255 aaPredicted RBP14.77□□□□□ -0.05
FOXN3-219ENST00000615335 NEDD1Q8NHV4 660 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.05
FOXN3-219ENST00000615335 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 STX8Q9UNK0 236 aa14.77□□□□□ -0.05
FOXN3-219ENST00000615335 EFCAB8A8MWE9 144 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 DHX8Q14562 1220 aaKnown RBP14.76□□□□□ -0.05
FOXN3-219ENST00000615335 STK38Q15208 465 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SEC23AQ15436 765 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SF3A1Q15459 793 aaKnown RBP14.76□□□□□ -0.05
FOXN3-219ENST00000615335 E2F4Q16254 413 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 NBPF12Q5TAG4 269 aaPredicted RBP14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SULF1Q8IWU6 871 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 LINC00301Q8NCQ3 95 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SDF4Q9BRK5 362 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SLC12A7Q9Y666 1083 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 A0A087WWV3 80 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 GOLGA8BA8MQT2 603 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 GSDMDP57764 484 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 OTUD7BQ6GQQ9 843 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SYNE3Q6ZMZ3 975 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
FOXN3-219ENST00000615335 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
FOXN3-219ENST00000615335 SGMS1Q86VZ5 419 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 WDR90Q96KV7 1748 aa14.76□□□□□ -0.05
FOXN3-219ENST00000615335 A0A1B0GVL5 298 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 TBC1D12O60347 775 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 GDF11O95390 407 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 KCNJ6P48051 423 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 CCZ1BP86790 482 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 CCZ1P86791 482 aaPredicted RBP14.75□□□□□ -0.05
FOXN3-219ENST00000615335 AOPEPQ8N6M6 819 aa14.75□□□□□ -0.05
FOXN3-219ENST00000615335 KCNG4Q8TDN1 519 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms