RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 JAKMIP2Q96AA8 810 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
RDM1-218ENST00000615288 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
RDM1-218ENST00000615288 ZCCHC17Q9NP64 241 aaKnown RBP11.13□□□□□ -0.63
RDM1-218ENST00000615288 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 TAB2Q9NYJ8 693 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 JRKLQ9Y4A0 524 aa11.13□□□□□ -0.63
RDM1-218ENST00000615288 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 C10orf71Q711Q0 1435 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 TTC26A0AVF1 554 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 NUTM2BA6NNL0 878 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 NUTM2EB1AL46 878 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 SLC26A4O43511 780 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 PRKAB2O43741 272 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 OPA1O60313 960 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 CCNE1P24864 410 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 PRCPP42785 496 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 NLRP5P59047 1200 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 HERVK_113P62684 666 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 AMPD3Q01432 767 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 CCDC122Q5T0U0 273 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 ALS2CLQ60I27 953 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 DGKHQ86XP1 1220 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 SMARCC1Q92922 1105 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 CAVIN3Q969G5 261 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 MTRQ99707 1265 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 SLF1Q9BQI6 1058 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 CRNKL1Q9BZJ0 848 aaKnown RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 ZBTB1Q9Y2K1 713 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 V9GY48 417 aaPredicted RBP11.12□□□□□ -0.63
RDM1-218ENST00000615288 COL24A1Q17RW2 1714 aa11.12□□□□□ -0.63
RDM1-218ENST00000615288 MYH1P12882 1939 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 FAM205CA6NFA0 338 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 LRRIQ3A6PVS8 624 aaPredicted RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 hCG_1984214I3L0E3 225 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 M0R2N6 131 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 PJA2O43164 708 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 TACC1O75410 805 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 NTSR2O95665 410 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 RHOXF2BP0C7M4 288 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 DNAJC21Q5F1R6 531 aaKnown RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 EARS2Q5JPH6 523 aaKnown RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 FKBP15Q5T1M5 1219 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 WDR59Q6PJI9 974 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 CCNI2Q6ZMN8 369 aaPredicted RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 DTHD1Q6ZMT9 781 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 ZNF713Q8N859 430 aaPredicted RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 FAM76AQ8TAV0 307 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 SECISBP2LQ93073 1101 aaKnown RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 ALS2CR12Q96Q35 445 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 SH3GL2Q99962 352 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 RHOXF2Q9BQY4 288 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 LRRC27Q9C0I9 530 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 VPS16Q9H269 839 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 LUC7LQ9NQ29 371 aaKnown RBP11.11□□□□□ -0.63
RDM1-218ENST00000615288 TCP11L1Q9NUJ3 509 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 ZNF652Q9Y2D9 606 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 MYH8P13535 1937 aa11.11□□□□□ -0.63
RDM1-218ENST00000615288 KLRC4O43908 158 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 SYF2O95926 243 aaKnown RBP11.1□□□□□ -0.63
RDM1-218ENST00000615288 EPHB4P54760 987 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 SKOR1P84550 965 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 GRM4Q14833 912 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 SF3B3Q15393 1217 aaKnown RBP11.1□□□□□ -0.63
RDM1-218ENST00000615288 SPA17Q15506 151 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 ZNF174Q15697 407 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 TTC31Q49AM3 519 aaPredicted RBP11.1□□□□□ -0.63
RDM1-218ENST00000615288 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 POTEDQ86YR6 584 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 RNF10Q8N5U6 811 aaKnown RBP11.1□□□□□ -0.63
RDM1-218ENST00000615288 SYN2Q92777 582 aaPredicted RBP11.1□□□□□ -0.63
RDM1-218ENST00000615288 P2RX5Q93086 422 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 TUBGCP2Q9BSJ2 902 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
RDM1-218ENST00000615288 STK17AQ9UEE5 414 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms