RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
PRKN-211ENST00000615065 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 CCDC171Q6TFL3 1326 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 FDX1P10109 184 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 NOVP48745 357 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 HAND2P61296 217 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 NUCB1Q02818 461 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 SNX17Q15036 470 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 TRIM60Q495X7 471 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 AGBL1Q96MI9 1066 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 ZHX1Q9UKY1 873 aaPredicted RBP17.53■□□□□ 0.4
PRKN-211ENST00000615065 PHF24Q9UPV7 400 aa17.53■□□□□ 0.4
PRKN-211ENST00000615065 PLA2G6O60733 806 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 SNAP25P60880 206 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 RCSD1Q6JBY9 416 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 ZNF467Q7Z7K2 595 aaPredicted RBP17.52■□□□□ 0.4
PRKN-211ENST00000615065 RNF180Q86T96 592 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
PRKN-211ENST00000615065 ACAD9Q9H845 621 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.52■□□□□ 0.4
PRKN-211ENST00000615065 LCTP09848 1927 aa17.52■□□□□ 0.4
PRKN-211ENST00000615065 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.39
PRKN-211ENST00000615065 SYNRGQ9UMZ2 1314 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 ADAMTS4O75173 837 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 SDSP20132 328 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 LRIT3Q3SXY7 679 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 PRDM5Q9NQX1 630 aaPredicted RBP17.51■□□□□ 0.39
PRKN-211ENST00000615065 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
PRKN-211ENST00000615065 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
PRKN-211ENST00000615065 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 ADCY6O43306 1168 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 ALAS1P13196 640 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 ACVR2BQ13705 512 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 ARMCX2Q7L311 632 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 A1CFQ9NQ94 594 aaKnown RBP17.5■□□□□ 0.39
PRKN-211ENST00000615065 PDLIM7Q9NR12 457 aa17.5■□□□□ 0.39
PRKN-211ENST00000615065 TKFCQ3LXA3 575 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 C1orf53Q5VUE5 145 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 TTBK2Q6IQ55 1244 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 SH3RF1Q7Z6J0 888 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 CCDC144CPQ8IYA2 1237 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 FAM133AQ8N9E0 248 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 ABHD16BQ9H3Z7 469 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 TCP11L1Q9NUJ3 509 aa17.49■□□□□ 0.39
PRKN-211ENST00000615065 MYADML2A6NDP7 307 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 POTEB2H3BUK9 544 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
PRKN-211ENST00000615065 SLC16A2P36021 539 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
PRKN-211ENST00000615065 IRX5P78411 483 aaPredicted RBP17.48■□□□□ 0.39
PRKN-211ENST00000615065 TLE2Q04725 743 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 MUM1L1Q5H9M0 696 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 AKNAD1Q5T1N1 836 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 KLHDC9Q8NEP7 349 aa17.48■□□□□ 0.39
PRKN-211ENST00000615065 NEDD4P46934 1319 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 TRIM43BA6NCK2 446 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 SOWAHBA6NEL2 793 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 DUSP11O75319 330 aaKnown RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 KCNA10Q16322 511 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 GPR153Q6NV75 609 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 MFSD6Q6ZSS7 791 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 TRIM43Q96BQ3 446 aaPredicted RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 TSEN34Q9BSV6 310 aaKnown RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 RANBP17Q9H2T7 1088 aaKnown RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 DIAPH3Q9NSV4 1193 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
PRKN-211ENST00000615065 ASTN1O14525 1302 aa17.47■□□□□ 0.39
PRKN-211ENST00000615065 ICAM1P05362 532 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 ACLYP53396 1101 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 SYDE2Q5VT97 1194 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
PRKN-211ENST00000615065 BTNL9Q6UXG8 535 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 Q7L0L9 218 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 BADQ92934 168 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
PRKN-211ENST00000615065 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
PRKN-211ENST00000615065 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
PRKN-211ENST00000615065 C6orf222P0C671 652 aaPredicted RBP17.45■□□□□ 0.38
PRKN-211ENST00000615065 PDHBP11177 359 aa17.45■□□□□ 0.38
PRKN-211ENST00000615065 PCP11498 1178 aaKnown RBP17.45■□□□□ 0.38
PRKN-211ENST00000615065 DEFB123Q8N688 67 aa17.45■□□□□ 0.38
PRKN-211ENST00000615065 UPF3AQ9H1J1 476 aaKnown RBP17.45■□□□□ 0.38
PRKN-211ENST00000615065 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms