RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 DIS3L2Q8IYB7 885 aaKnown RBP21.54■■□□□ 1.04
CHTOP-207ENST00000614256 PROCA1Q8NCQ7 364 aaPredicted RBP21.54■■□□□ 1.04
CHTOP-207ENST00000614256 NLRP5P59047 1200 aa21.53■■□□□ 1.04
CHTOP-207ENST00000614256 NR5A1Q13285 461 aa21.53■■□□□ 1.04
CHTOP-207ENST00000614256 A0A0G2JMZ2 1700 aa21.53■■□□□ 1.04
CHTOP-207ENST00000614256 SPRYD7Q5W111 196 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 ATG4CQ96DT6 458 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 MS4A4AQ96JQ5 239 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L15C9J2P7 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L13C9JLJ4 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L11C9JVI0 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L18D6R9N7 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L22D6RA61 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L17D6RBQ6 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L19D6RCP7 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USP17L20D6RJB6 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 U2AF2P26368 475 aaKnown RBP eCLIP21.52■■□□□ 1.043e-7■■■■□ 22.1
CHTOP-207ENST00000614256 USP17L24Q0WX57 530 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 SNAPC2Q13487 334 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 USH1GQ495M9 461 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 NOM1Q5C9Z4 860 aaKnown RBP21.52■■□□□ 1.04
CHTOP-207ENST00000614256 FBXO11Q86XK2 927 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
CHTOP-207ENST00000614256 CCDC148Q8NFR7 591 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 ZMYND12Q9H0C1 365 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 PCDHA1Q9Y5I3 950 aa21.52■■□□□ 1.04
CHTOP-207ENST00000614256 ZNF536O15090 1300 aa21.51■■□□□ 1.03
CHTOP-207ENST00000614256 DSG3P32926 999 aa21.51■■□□□ 1.03
CHTOP-207ENST00000614256 GPAT2Q6NUI2 795 aa21.51■■□□□ 1.03
CHTOP-207ENST00000614256 AMNQ9BXJ7 453 aa21.51■■□□□ 1.03
CHTOP-207ENST00000614256 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
CHTOP-207ENST00000614256 SMCO2A6NFE2 343 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 VWA5AO00534 786 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 COG2Q14746 738 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 POTEEQ6S8J3 1075 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 TNFRSF25Q93038 417 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 ZSCAN16Q9H4T2 348 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 AGTPBP1Q9UPW5 1226 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 FAM205CA6NFA0 338 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 SPDYE16A6NNV3 312 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 BAG4O95429 457 aaKnown RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 HOXA7P31268 230 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 KRT2P35908 639 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 SAFBQ15424 915 aaKnown RBP eCLIP21.5■■□□□ 1.035e-7■■□□□ 12
CHTOP-207ENST00000614256 EARS2Q5JPH6 523 aaKnown RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 RASAL3Q86YV0 1011 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 RASGRP4Q8TDF6 673 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 AGBL1Q96MI9 1066 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 FOXP1Q9H334 677 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-207ENST00000614256 PCDHA4Q9UN74 947 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 TLL2Q9Y6L7 1015 aa21.5■■□□□ 1.03
CHTOP-207ENST00000614256 M0R2N6 131 aa21.49■■□□□ 1.03
CHTOP-207ENST00000614256 ZNF157P51786 506 aaPredicted RBP21.49■■□□□ 1.03
CHTOP-207ENST00000614256 DNM1Q05193 864 aaKnown RBP21.49■■□□□ 1.03
CHTOP-207ENST00000614256 CLEC17AQ6ZS10 378 aa21.49■■□□□ 1.03
CHTOP-207ENST00000614256 BLIDQ8IZY5 108 aa21.49■■□□□ 1.03
CHTOP-207ENST00000614256 DAGLBQ8NCG7 672 aa21.49■■□□□ 1.03
CHTOP-207ENST00000614256 REPS2Q8NFH8 660 aa21.49■■□□□ 1.03
CHTOP-207ENST00000614256 CCDC12Q8WUD4 166 aaPredicted RBP21.49■■□□□ 1.03
CHTOP-207ENST00000614256 RBBP6Q7Z6E9 1792 aaKnown RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 ESYT2A0FGR8 921 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 OPLAHO14841 1288 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 ZBTB48P10074 688 aaPredicted RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 CALML3P27482 149 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 PPP1R18Q6NYC8 613 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 FASTKD5Q7L8L6 764 aaKnown RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 NOSTRINQ8IVI9 506 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 CPXCR1Q8N123 301 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 FAM177A1Q8N128 213 aaPredicted RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 BRI3BPQ8WY22 251 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 RAVER2Q9HCJ3 691 aaKnown RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 GTF2A2P52657 109 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 GNL2Q13823 731 aaKnown RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 RGMBQ6NW40 437 aa21.48■■□□□ 1.03
CHTOP-207ENST00000614256 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
CHTOP-207ENST00000614256 CCL15-CCL14A0A0B4J2E2 113 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 TMEM88BA6NKF7 163 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 PEX10O60683 326 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 ICAM1P05362 532 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 CETPP11597 493 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 ADCY7P51828 1080 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 FSTL1Q12841 308 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 CCL15Q16663 113 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 BRAPQ7Z569 592 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 FTOQ9C0B1 505 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHTOP-207ENST00000614256 ASCC2Q9H1I8 757 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-207ENST00000614256 C6orf50Q9HD87 102 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 PCDHA6Q9UN73 950 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 PCDHA8Q9Y5H6 950 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 MYH7BA7E2Y1 1941 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 MYPNQ86TC9 1320 aa21.47■■□□□ 1.03
CHTOP-207ENST00000614256 MYSM1Q5VVJ2 828 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 BRMS1Q9HCU9 246 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 RIC8AQ9NPQ8 531 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 HOXC10Q9NYD6 342 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 CCPG1Q9ULG6 757 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 CNPY2Q9Y2B0 182 aa21.46■■□□□ 1.03
CHTOP-207ENST00000614256 ZBED4O75132 1171 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms