RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 PCP11498 1178 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 PPP4CP60510 307 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 DPYDQ12882 1025 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 NR5A1Q13285 461 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 CASP8Q14790 479 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 GRIK5Q16478 980 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 FANCBQ8NB91 859 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 EYA3Q99504 573 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 LIMA1Q9UHB6 759 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 MYH6P13533 1939 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 GYS2P54840 703 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 SBK1Q52WX2 424 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 MFSD14BQ5SR56 506 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
ATF3-211ENST00000613954 RRP15Q9Y3B9 282 aaKnown RBP12.61□□□□□ -0.39
ATF3-211ENST00000613954 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 USP17L21D6R901 530 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 N4BP3O15049 544 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 KRT2P35908 639 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 AFMP43652 599 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
ATF3-211ENST00000613954 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 MAP9Q49MG5 647 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 RPGRIP1Q96KN7 1286 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 EFCC1Q9HA90 598 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 BRMS1Q9HCU9 246 aa12.6□□□□□ -0.39
ATF3-211ENST00000613954 ARPP21Q9UBL0 812 aaPredicted RBP12.6□□□□□ -0.39
ATF3-211ENST00000613954 FGRP09769 529 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 ATP2B1P20020 1258 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATF3-211ENST00000613954 STX17P56962 302 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 VSNL1P62760 191 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 ZNF654Q8IZM8 581 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 ESR2Q92731 530 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 RHOXF2Q9BQY4 288 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 FAN1Q9Y2M0 1017 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 LAMB1P07942 1786 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 CHRNA5P30532 468 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 GTF2IP78347 998 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 AMPD2Q01433 879 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 ACRBPQ8NEB7 543 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 MYH8P13535 1937 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 BAZ2AQ9UIF9 1905 aaKnown RBP12.59□□□□□ -0.39
ATF3-211ENST00000613954 C10orf71Q711Q0 1435 aa12.59□□□□□ -0.39
ATF3-211ENST00000613954 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 G3V3G9 751 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 PLCG2P16885 1265 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 ARHGAP25P42331 645 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 COPB1P53618 953 aaKnown RBP12.58□□□□□ -0.4
ATF3-211ENST00000613954 ERVK-24P63145 666 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 KRT31Q15323 416 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 NUP133Q8WUM0 1156 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 EPSTI1Q96J88 318 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 PHF20Q9BVI0 1012 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 PDGFDQ9GZP0 370 aaPredicted RBP12.58□□□□□ -0.4
ATF3-211ENST00000613954 HAUS4Q9H6D7 363 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 CTNND2Q9UQB3 1225 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
ATF3-211ENST00000613954 A0A087X0B3 334 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 PSMD14O00487 310 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 ORC4O43929 436 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 BTDP43251 543 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATF3-211ENST00000613954 PAK1Q13153 545 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
ATF3-211ENST00000613954 RBM28Q9NW13 759 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms