RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 JMJD8Q96S16 334 aa4.04□□□□□ -1.76
LINC00649-216ENST00000613667 RNF38Q9H0F5 515 aa4.04□□□□□ -1.76
LINC00649-216ENST00000613667 MIR1-1HGQ9H1L0 117 aa4.04□□□□□ -1.76
LINC00649-216ENST00000613667 FAM8A1Q9UBU6 413 aa4.04□□□□□ -1.76
LINC00649-216ENST00000613667 FAN1Q9Y2M0 1017 aa4.04□□□□□ -1.76
LINC00649-216ENST00000613667 GIPC1O14908 333 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 LIG3P49916 1009 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 TSNAXIP1Q2TAA8 658 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 LIMS2Q7Z4I7 341 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 TMEM52Q8NDY8 209 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 JARID2Q92833 1246 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-216ENST00000613667 CCDC74BQ96LY2 380 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 NOX5Q96PH1 765 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 KIF2CQ99661 725 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 SPATA6Q9NWH7 488 aaPredicted RBP4.03□□□□□ -1.76
LINC00649-216ENST00000613667 KLHL3Q9UH77 587 aa4.03□□□□□ -1.76
LINC00649-216ENST00000613667 LTBP3Q9NS15 1303 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 A0A1W2PQ45 241 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-216ENST00000613667 A0A1W2PQY0 241 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 PRAMEF1O95521 474 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 DBHP09172 617 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 LMNB1P20700 586 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 MAPK8P45983 427 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 SARSP49591 514 aaKnown RBP4.02□□□□□ -1.77
LINC00649-216ENST00000613667 ATXN1P54253 815 aaKnown RBP4.02□□□□□ -1.77
LINC00649-216ENST00000613667 CCDC85BQ15834 202 aaPredicted RBP4.02□□□□□ -1.77
LINC00649-216ENST00000613667 GLB1LQ6UWU2 654 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 NTMQ9P121 344 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 REV1Q9UBZ9 1251 aa4.02□□□□□ -1.77
LINC00649-216ENST00000613667 WDR33Q9C0J8 1336 aaKnown RBP4.01□□□□□ -1.77
LINC00649-216ENST00000613667 ASGR2P07307 311 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 ENDOUP21128 410 aaKnown RBP4.01□□□□□ -1.77
LINC00649-216ENST00000613667 FHL2Q14192 279 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 NBPF9Q3BBW0 867 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 KLC2Q9H0B6 622 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 DCTN4Q9UJW0 460 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
LINC00649-216ENST00000613667 UBOX5O94941 541 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 PRR5P85299 388 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 KIAA2012Q0VF49 1180 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 ICAM4Q14773 271 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 B4GALNT3Q6L9W6 998 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 B3GNT8Q7Z7M8 397 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 PHACTR4Q8IZ21 702 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 LGI4Q8N135 537 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 ADAMTS17Q8TE56 1095 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 CDADC1Q9BWV3 514 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 INVSQ9Y283 1065 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 TLR6Q9Y2C9 796 aa4□□□□□ -1.77
LINC00649-216ENST00000613667 ZNF536O15090 1300 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 PRR36Q9H6K5 1346 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 SRGAP3O43295 1099 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 CYBBP04839 570 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 NCAM1P13591 858 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 CTSKP43235 329 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 FMR1Q06787 632 aaKnown RBP eCLIP3.99□□□□□ -1.77
LINC00649-216ENST00000613667 PAQR3Q6TCH7 311 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 BNC2Q6ZN30 1099 aaPredicted RBP3.99□□□□□ -1.77
LINC00649-216ENST00000613667 BCAS3Q9H6U6 928 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 AP5S1Q9NUS5 200 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 SPG7Q9UQ90 795 aa3.99□□□□□ -1.77
LINC00649-216ENST00000613667 POLR3KQ9Y2Y1 108 aaPredicted RBP3.99□□□□□ -1.77
LINC00649-216ENST00000613667 SIGLEC6O43699 453 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 ZNF205O95201 554 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 NBPF12Q5TAG4 269 aaPredicted RBP3.98□□□□□ -1.77
LINC00649-216ENST00000613667 BORAQ6PGQ7 559 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 TTLL7Q6ZT98 887 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 PALM2Q8IXS6 379 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 CCDC82Q8N4S0 544 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 CHFRQ96EP1 664 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 CD248Q9HCU0 757 aa3.98□□□□□ -1.77
LINC00649-216ENST00000613667 FAM221AA4D161 298 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 SOWAHDA6NJG2 315 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 MEIS1O00470 390 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 RGS13O14921 159 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 HTR3BO95264 441 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 PMLP29590 882 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 GBP1P32455 592 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 RGL3Q3MIN7 710 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 CDCP2Q5VXM1 449 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 ALG1LQ6GMV1 187 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 FAM124AQ86V42 546 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 SMARCC2Q8TAQ2 1214 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 USTQ9Y2C2 406 aa3.97□□□□□ -1.77
LINC00649-216ENST00000613667 F8W031 263 aaPredicted RBP3.96□□□□□ -1.78
LINC00649-216ENST00000613667 MAPK1P28482 360 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 BMP8BP34820 402 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 NANOS3P60323 173 aaKnown RBP3.96□□□□□ -1.78
LINC00649-216ENST00000613667 RNF4P78317 190 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 SURF1Q15526 300 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 RTP2Q5QGT7 225 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 LRCH2Q5VUJ6 765 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 SEMA4AQ9H3S1 761 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 RXFP1Q9HBX9 757 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 CHST7Q9NS84 486 aa3.96□□□□□ -1.78
LINC00649-216ENST00000613667 F13A1P00488 732 aa3.95□□□□□ -1.78
LINC00649-216ENST00000613667 VAV1P15498 845 aa3.95□□□□□ -1.78
LINC00649-216ENST00000613667 TACR1P25103 407 aa3.95□□□□□ -1.78
LINC00649-216ENST00000613667 POLR2BP30876 1174 aaKnown RBP3.95□□□□□ -1.78
LINC00649-216ENST00000613667 CHMP4BP1P59074 171 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms