RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 NKX3-2P78367 333 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
CBWD1-222ENST00000613508 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 SHHQ15465 462 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 BADQ92934 168 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
CBWD1-222ENST00000613508 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 UPF3AQ9H1J1 476 aaKnown RBP13.21□□□□□ -0.29
CBWD1-222ENST00000613508 PRDM5Q9NQX1 630 aaPredicted RBP13.21□□□□□ -0.29
CBWD1-222ENST00000613508 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
CBWD1-222ENST00000613508 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
CBWD1-222ENST00000613508 ELP1O95163 1332 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 ORC4O43929 436 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 SLC1A4P43007 532 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 RCSD1Q6JBY9 416 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
CBWD1-222ENST00000613508 VCANP13611 3396 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ADCY6O43306 1168 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 MCCP23508 829 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ITGB8P26012 769 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 PDE1AP54750 535 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 GJA9P57773 515 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
CBWD1-222ENST00000613508 FAAP100Q0VG06 881 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 AAMPQ13685 434 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 KCNA10Q16322 511 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ARMCX2Q7L311 632 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
CBWD1-222ENST00000613508 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
CBWD1-222ENST00000613508 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
CBWD1-222ENST00000613508 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 TSPY2A6NKD2 308 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 PQBP1O60828 265 aaKnown RBP13.18□□□□□ -0.3
CBWD1-222ENST00000613508 SLC4A3P48751 1232 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 CDK7P50613 346 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
CBWD1-222ENST00000613508 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
CBWD1-222ENST00000613508 CHD9Q3L8U1 2897 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 ASB14A6NK59 587 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 CTAGE5O15320 804 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 NMT2O60551 498 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 RAG1P15918 1043 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 ZNF697Q5TEC3 545 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 DCAF4Q8WV16 495 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 TMEM39AQ9NV64 488 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
CBWD1-222ENST00000613508 TMEM265A0A087WTH1 108 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 DLL1O00548 723 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 RANBP6O60518 1105 aaKnown RBP13.16□□□□□ -0.3
CBWD1-222ENST00000613508 TIMP1P01033 207 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 FGAP02671 866 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 ICAM1P05362 532 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 ASGR1P07306 291 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
CBWD1-222ENST00000613508 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
CBWD1-222ENST00000613508 EPHB4P54760 987 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 FPGSQ05932 587 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
CBWD1-222ENST00000613508 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CBWD1-222ENST00000613508 ASTN1O14525 1302 aa13.15□□□□□ -0.3
CBWD1-222ENST00000613508 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
CBWD1-222ENST00000613508 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
CBWD1-222ENST00000613508 ALAS1P13196 640 aa13.15□□□□□ -0.3
CBWD1-222ENST00000613508 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms