RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 STK10O94804 968 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MKRN3Q13064 507 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 WDR60Q8WVS4 1066 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 BHMT2Q9H2M3 363 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 SYCE1LA8MT33 242 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MYO1FO00160 1098 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 SPAG7O75391 227 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 STAT2P52630 851 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ITGB3BPQ13352 177 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 TWISTNBQ3B726 338 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 NXNQ6DKJ4 435 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 THEMISQ8N1K5 641 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC43Q96MW1 224 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 LRRC27Q9C0I9 530 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 TMOD4Q9NZQ9 345 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 GOLGA8CPA6NN73 597 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ECE1P42892 770 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 DCTN2Q13561 401 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 CATSPER1Q8NEC5 780 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 NECTIN2Q92692 538 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 SKA1Q96BD8 255 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ATP4AP20648 1035 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 TNIP2Q8NFZ5 429 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 JARID2Q92833 1246 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 IFIH1Q9BYX4 1025 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ARHGAP42A6NI28 874 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 PSMA7O14818 248 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 FCHSD2O94868 740 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MRPS9P82933 396 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 RCN1Q15293 331 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 SEPT8Q92599 483 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MAF1Q9H063 256 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 HYOU1Q9Y4L1 999 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 CETN1Q12798 172 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 KIAA1468Q9P260 1216 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MKL2Q9ULH7 1088 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 NCOA3Q9Y6Q9 1424 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 KRT18P05783 430 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 SERPINB8P50452 374 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MLECQ14165 292 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 CALML6Q8TD86 181 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC87Q9NVE4 849 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 LCMT1Q9UIC8 334 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 APOA1P02647 267 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ERCC5P28715 1186 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 PALM2Q8IXS6 379 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 DDHD1Q8NEL9 900 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 EHD2Q9NZN4 543 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 RRAGBQ5VZM2 374 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 NYAP1Q6ZVC0 841 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 MAP2P11137 1827 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 POTEFA5A3E0 1075 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 AACSQ86V21 672 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 UBL4BQ8N7F7 174 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 GRAMD1AQ96CP6 724 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 ZWILCHQ9H900 591 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 A0A1W2PQ27 194 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 A0A1W2PQ64 194 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 A0A1W2PQD8 194 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 PDCLQ13371 301 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 THOC7Q6I9Y2 204 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 DAB1O75553 588 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 KRT3P12035 628 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 PPP1R2P41236 205 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 TSR2Q969E8 191 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 RANBP17Q9H2T7 1088 aaKnown RBP5.41□□□□□ -1.54
VPS13D-213ENST00000613099 NDE1Q9NXR1 346 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 TBC1D2BQ9UPU7 963 aa5.41□□□□□ -1.54
VPS13D-213ENST00000613099 PDE1AP54750 535 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ANKIB1Q9P2G1 1089 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 IKBKBO14920 756 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 AP2B1P63010 937 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 GUCY2DQ02846 1103 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ANO5Q75V66 913 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC84Q86UT8 332 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ZRANB1Q9UGI0 708 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 KRI1Q8N9T8 703 aaKnown RBP5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ATP6V1G3Q96LB4 118 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 C15orf41Q9Y2V0 281 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 TBC1D12O60347 775 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 DKC1O60832 514 aaKnown RBP eCLIP5.4□□□□□ -1.549e-16■■■■■ 70.8
VPS13D-213ENST00000613099 SCTRP47872 440 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 NR1H3Q13133 447 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 OTUD6AQ7L8S5 288 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ZFYVE9O95405 1425 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 TBC1D8O95759 1140 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 KCNA3P22001 575 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 SERPINB10P48595 397 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD23Q86SG2 305 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ZC3H15Q8WU90 426 aaKnown RBP5.4□□□□□ -1.54
VPS13D-213ENST00000613099 DHX58Q96C10 678 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 ADGRL2O95490 1459 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 MYH1P12882 1939 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 PPIP5K2O43314 1243 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 PPP1R37O75864 691 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 FESP07332 822 aa5.4□□□□□ -1.54
VPS13D-213ENST00000613099 TDRD12Q587J7 1177 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms