RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SERPINB2P05120 415 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 CD19P15391 556 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 CASP14P31944 242 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 PTPN21Q16825 1174 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 RPGRIP1Q96KN7 1286 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 ZNF408Q9H9D4 720 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 SPATA31A3Q5VYP0 1347 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 VIMP08670 466 aaKnown RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 ABCB4P21439 1286 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 CDC25BP30305 580 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 TNFAIP1Q13829 316 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 UAP1Q16222 522 aaPredicted RBP15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 ABCB5Q2M3G0 1257 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 DCUN1D2Q6PH85 259 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 IVNS1ABPQ9Y6Y0 642 aa15.74■□□□□ 0.11
PCDHB16-201ENST00000609684 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 TNNI1P19237 187 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 POLR2FP61218 127 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 CACTINQ8WUQ7 758 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 SERPINA10Q9UK55 444 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 USP17L8P0C7I0 530 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 GOLGA8FQ08AF8 430 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 GOLGA8DPQ0D2H9 430 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 ADAM9Q13443 819 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 PLA2G4DQ86XP0 818 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM178BQ8IXR5 827 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 EPN1Q9Y6I3 576 aaPredicted RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 CDC42BPBQ9Y5S2 1711 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 LAD1O00515 517 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 ASPRV1Q53RT3 343 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 C10orf67Q8IYJ2 551 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 IWS1Q96ST2 819 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 SLFN14P0C7P3 912 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 PPARDQ03181 441 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 DIXDC1Q155Q3 683 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 MRRFQ96E11 262 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 CNOT6LQ96LI5 555 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 STRBPQ96SI9 672 aaKnown RBP15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 KIAA1024Q9UPX6 916 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 FAM169AQ9Y6X4 670 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
PCDHB16-201ENST00000609684 GABPB1Q06547 395 aaPredicted RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CCDC105Q8IYK2 499 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 TUBGCP2Q9BSJ2 902 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 THRAP3Q9Y2W1 955 aaKnown RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 COL4A3BPQ9Y5P4 624 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 ABCA6Q8N139 1617 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 BUB1O43683 1085 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 ATP5DP30049 168 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CDC25AP30304 524 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 GBP6Q6ZN66 633 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 OTUD6AQ7L8S5 288 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CNKSR1Q969H4 720 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 DYNLL2Q96FJ2 89 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 AMNQ9BXJ7 453 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CA8P35219 290 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 AMFRQ9UKV5 643 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 PCDHB6Q9Y5E3 794 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 ARL1P40616 181 aaPredicted RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 BRD3Q15059 726 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 SPICE1Q8N0Z3 855 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 SMC6Q96SB8 1091 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 HYOU1Q9Y4L1 999 aa15.72■□□□□ 0.11
PCDHB16-201ENST00000609684 PABPN1LA6NDY0 278 aaKnown RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 K7ENM7 598 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 TTLL1O95922 423 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 KRT19P08727 400 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 IRX3P78415 501 aaPredicted RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 ARHGEF16Q5VV41 709 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 PGBD1Q96JS3 809 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 EFCAB8A8MWE9 144 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 PRPF3O43395 683 aaKnown RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 SLC8A3P57103 927 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 MECOMQ03112 1051 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 SETDB1Q15047 1291 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 PTPROQ16827 1216 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 KCTD1Q719H9 257 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 PIGSQ96S52 555 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 ZNF335Q9H4Z2 1342 aaPredicted RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 BBOX1O75936 387 aa15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 FOSP01100 380 aaPredicted RBP15.71■□□□□ 0.11
PCDHB16-201ENST00000609684 XKR9Q5GH70 373 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms