RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 DDX19AQ9NUU7 478 aaKnown RBP11.12□□□□□ -0.63
CTCFL-222ENST00000609232 OGFRQ9NZT2 677 aa11.12□□□□□ -0.63
CTCFL-222ENST00000609232 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
CTCFL-222ENST00000609232 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 CFBP00751 764 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 RRAGBQ5VZM2 374 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 ATL3Q6DD88 541 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 TMTC3Q6ZXV5 915 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 PSMB7Q99436 277 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
CTCFL-222ENST00000609232 MEIS1O00470 390 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 TPM3P06753 285 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 FGRP09769 529 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 SKILP12757 684 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 UBASH3AP57075 661 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-222ENST00000609232 LRRC41Q15345 812 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 DACT2Q5SW24 774 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 NOSTRINQ8IVI9 506 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 NIM1KQ8IY84 436 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 MMP1P03956 469 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 FAM160A1Q05DH4 1040 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
CTCFL-222ENST00000609232 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
CTCFL-222ENST00000609232 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
CTCFL-222ENST00000609232 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 PEX10O60683 326 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
CTCFL-222ENST00000609232 TPM4P67936 248 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 RCSD1Q6JBY9 416 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 RGS22Q8NE09 1264 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 SAMM50Q9Y512 469 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 AKR1B1P15121 316 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 KRT2P35908 639 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 GNAQP50148 359 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 DALRD3Q5D0E6 543 aaKnown RBP11.1□□□□□ -0.63
CTCFL-222ENST00000609232 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-222ENST00000609232 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
CTCFL-222ENST00000609232 RCAN1P53805 252 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
CTCFL-222ENST00000609232 ANO10Q9NW15 660 aa11.1□□□□□ -0.63
CTCFL-222ENST00000609232 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SFI1A8K8P3 1242 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SCG2P13521 617 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SLC1A4P43007 532 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 DLGAP5Q15398 846 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SMARCE1Q969G3 411 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 YEATS4O95619 227 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 MRPS25P82663 173 aaKnown RBP11.09□□□□□ -0.63
CTCFL-222ENST00000609232 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
CTCFL-222ENST00000609232 TOP1P11387 765 aaKnown RBP11.08□□□□□ -0.63
CTCFL-222ENST00000609232 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.63
CTCFL-222ENST00000609232 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.63
CTCFL-222ENST00000609232 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.63
CTCFL-222ENST00000609232 PSMD14O00487 310 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 SEPT2Q15019 361 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 PRMT6Q96LA8 375 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-222ENST00000609232 ZDHHC15Q96MV8 337 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 NAT10Q9H0A0 1025 aaKnown RBP11.08□□□□□ -0.64
CTCFL-222ENST00000609232 NFE2L3Q9Y4A8 694 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 YDJCA8MPS7 323 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 STAT6P42226 847 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 FAM193AP78312 1265 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-222ENST00000609232 STX1AQ16623 288 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 TTC38Q5R3I4 469 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 ZNF668Q96K58 619 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-222ENST00000609232 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 CEP290O15078 2479 aa11.08□□□□□ -0.64
CTCFL-222ENST00000609232 RNASE9P60153 205 aaKnown RBP11.07□□□□□ -0.64
CTCFL-222ENST00000609232 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
CTCFL-222ENST00000609232 SHC4Q6S5L8 630 aa11.07□□□□□ -0.64
CTCFL-222ENST00000609232 CACTINQ8WUQ7 758 aaKnown RBP11.07□□□□□ -0.64
CTCFL-222ENST00000609232 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
CTCFL-222ENST00000609232 TFR2Q9UP52 801 aa11.07□□□□□ -0.64
CTCFL-222ENST00000609232 SLX4Q8IY92 1834 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms