RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TRDNQ13061 729 aa17.73■□□□□ 0.43
LMBR1-220ENST00000609081 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
LMBR1-220ENST00000609081 DIS3LQ8TF46 1054 aaKnown RBP17.73■□□□□ 0.43
LMBR1-220ENST00000609081 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
LMBR1-220ENST00000609081 RANBP17Q9H2T7 1088 aaKnown RBP17.73■□□□□ 0.43
LMBR1-220ENST00000609081 ZSWIM5Q9P217 1185 aa17.73■□□□□ 0.43
LMBR1-220ENST00000609081 ZNF536O15090 1300 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 B4E1Z4 1266 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 H0YGN5 161 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 DNM1LO00429 736 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 ICAM1P05362 532 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 ZNF543Q08ER8 600 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 UBAC1Q9BSL1 405 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 KAT14Q9H8E8 782 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
LMBR1-220ENST00000609081 PNMA1Q8ND90 353 aa17.71■□□□□ 0.43
LMBR1-220ENST00000609081 TRERF1Q96PN7 1200 aa17.71■□□□□ 0.43
LMBR1-220ENST00000609081 IL25Q9H293 177 aa17.71■□□□□ 0.43
LMBR1-220ENST00000609081 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
LMBR1-220ENST00000609081 SMCHD1A6NHR9 2005 aa17.71■□□□□ 0.42
LMBR1-220ENST00000609081 ALPK3Q96L96 1907 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 AKR1A1P14550 325 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
LMBR1-220ENST00000609081 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 MAF1Q9H063 256 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 TNKSO95271 1327 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
LMBR1-220ENST00000609081 KBTBD13C9JR72 458 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 RARBP10826 455 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 ALAS1P13196 640 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 CCDC174Q6PII3 467 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 MAP4K1Q92918 833 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 ABHD16BQ9H3Z7 469 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
LMBR1-220ENST00000609081 A1CFQ9NQ94 594 aaKnown RBP17.69■□□□□ 0.42
LMBR1-220ENST00000609081 FRMPD2Q68DX3 1309 aaPredicted RBP17.69■□□□□ 0.42
LMBR1-220ENST00000609081 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 ASB14A6NK59 587 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 CYP21A2P08686 494 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
LMBR1-220ENST00000609081 SLC16A2P36021 539 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 PTH1RQ03431 593 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
LMBR1-220ENST00000609081 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 IFIT1BQ5T764 474 aaKnown RBP17.68■□□□□ 0.42
LMBR1-220ENST00000609081 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 RASGRP2Q7LDG7 609 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 RALYLQ86SE5 291 aaKnown RBP17.68■□□□□ 0.42
LMBR1-220ENST00000609081 FAM133AQ8N9E0 248 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 FAM184BQ9ULE4 1060 aa17.68■□□□□ 0.42
LMBR1-220ENST00000609081 ERICH2A1L162 156 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
LMBR1-220ENST00000609081 RNF180Q86T96 592 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
LMBR1-220ENST00000609081 CYP39A1Q9NYL5 469 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 MCM3APO60318 1980 aa17.67■□□□□ 0.42
LMBR1-220ENST00000609081 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
LMBR1-220ENST00000609081 SENP6Q9GZR1 1112 aaPredicted RBP17.66■□□□□ 0.42
LMBR1-220ENST00000609081 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
LMBR1-220ENST00000609081 PARP1P09874 1014 aaKnown RBP17.65■□□□□ 0.42
LMBR1-220ENST00000609081 ACVR2BQ13705 512 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 LRRC41Q15345 812 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 SEC23AQ15436 765 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 HABP4Q5JVS0 413 aaKnown RBP17.65■□□□□ 0.42
LMBR1-220ENST00000609081 CASC1Q6TDU7 716 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 ARMCX2Q7L311 632 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 FGD4Q96M96 766 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 ESYT1Q9BSJ8 1104 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 MTA3Q9BTC8 594 aa17.65■□□□□ 0.42
LMBR1-220ENST00000609081 MYH6P13533 1939 aa17.64■□□□□ 0.42
LMBR1-220ENST00000609081 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 E7EWF7 191 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 DUSP11O75319 330 aaKnown RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 NEFLP07196 543 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 SNAP25P60880 206 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 MUM1L1Q5H9M0 696 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 GJC2Q5T442 439 aaPredicted RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 RGS22Q8NE09 1264 aa17.64■□□□□ 0.41
LMBR1-220ENST00000609081 MPHOSPH6Q99547 160 aaKnown RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 TSEN34Q9BSV6 310 aaKnown RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 ZHX1Q9UKY1 873 aaPredicted RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 COLQQ9Y215 455 aaPredicted RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
LMBR1-220ENST00000609081 IFIT3O14879 490 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms