RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 M0R2N6 131 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 U2AF2P26368 475 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 FAM160B2Q86V87 743 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 ZNF784Q8NCA9 323 aaPredicted RBP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 MS4A4AQ96JQ5 239 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 OPLAHO14841 1288 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 PEX10O60683 326 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 FLOT1O75955 427 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
CTCFL-221ENST00000608903 NLRP5P59047 1200 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
CTCFL-221ENST00000608903 TRIM29Q14134 588 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 CCDC174Q6PII3 467 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTCFL-221ENST00000608903 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-221ENST00000608903 TMOD4Q9NZQ9 345 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 MYH15Q9Y2K3 1946 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 NAPAP54920 295 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
CTCFL-221ENST00000608903 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 ZMYND12Q9H0C1 365 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 ADAMTS5Q9UNA0 930 aa13.3□□□□□ -0.28
CTCFL-221ENST00000608903 COL11A1P12107 1806 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-221ENST00000608903 SMCO2A6NFE2 343 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 YY1P25490 414 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 DSG3P32926 999 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 HUNKP57058 714 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 SAPCD2Q86UD0 394 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 AGBL1Q96MI9 1066 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 GDPD2Q9HCC8 539 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
CTCFL-221ENST00000608903 CNPY2Q9Y2B0 182 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 WNT7AO00755 349 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 USH1GQ495M9 461 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 TBC1D5Q92609 795 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 SLC38A10Q9HBR0 1119 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 TMEM260Q9NX78 707 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 PCDHA6Q9UN73 950 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 PCDHA4Q9UN74 947 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 PCDHA8Q9Y5H6 950 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 VWA5AO00534 786 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 TOMM70O94826 608 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 XBP1P17861 261 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 KRT2P35908 639 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 COG2Q14746 738 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
CTCFL-221ENST00000608903 RAVER2Q9HCJ3 691 aaKnown RBP13.28□□□□□ -0.28
CTCFL-221ENST00000608903 ESYT2A0FGR8 921 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 EDIL3O43854 480 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-221ENST00000608903 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 BRI3BPQ8WY22 251 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 USP28Q96RU2 1077 aa13.27□□□□□ -0.28
CTCFL-221ENST00000608903 hCG_1984214I3L0E3 225 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 UBE2SQ16763 222 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 ZNF713Q8N859 430 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-221ENST00000608903 PTPN18Q99952 460 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 RIC8AQ9NPQ8 531 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-221ENST00000608903 AGTPBP1Q9UPW5 1226 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 RIPK3Q9Y572 518 aa13.27□□□□□ -0.29
CTCFL-221ENST00000608903 ICAM1P05362 532 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
CTCFL-221ENST00000608903 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTCFL-221ENST00000608903 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms