RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 COPB2P35606 906 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
HDDC2-204ENST00000608295 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
HDDC2-204ENST00000608295 UBA5Q9GZZ9 404 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 CRISPLD2Q9H0B8 497 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 CNNM2Q9H8M5 875 aa17■□□□□ 0.31
HDDC2-204ENST00000608295 DDX49Q9Y6V7 483 aaKnown RBP17■□□□□ 0.31
HDDC2-204ENST00000608295 E7EWF7 191 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
HDDC2-204ENST00000608295 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 TRDNQ13061 729 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 BMP2KLQ5H9B9 411 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 PRPF38BQ5VTL8 546 aaKnown RBP16.99■□□□□ 0.31
HDDC2-204ENST00000608295 OLFML2BQ68BL8 750 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 DDX20Q9UHI6 824 aaKnown RBP16.99■□□□□ 0.31
HDDC2-204ENST00000608295 LRRC37A2A6NM11 1700 aa16.99■□□□□ 0.31
HDDC2-204ENST00000608295 ATP2A1O14983 1001 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 ZNF792Q3KQV3 632 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
HDDC2-204ENST00000608295 LHX8Q68G74 356 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
HDDC2-204ENST00000608295 SENP2Q9HC62 589 aa16.98■□□□□ 0.31
HDDC2-204ENST00000608295 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
HDDC2-204ENST00000608295 OAZ1P54368 228 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 COL9A3Q14050 684 aaPredicted RBP16.97■□□□□ 0.31
HDDC2-204ENST00000608295 USH1GQ495M9 461 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 CHST13Q8NET6 341 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 MAP4K1Q92918 833 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 TTC14Q96N46 770 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 PURBQ96QR8 312 aaKnown RBP16.97■□□□□ 0.31
HDDC2-204ENST00000608295 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
HDDC2-204ENST00000608295 A1CFQ9NQ94 594 aaKnown RBP16.97■□□□□ 0.31
HDDC2-204ENST00000608295 OGDHLQ9ULD0 1010 aa16.97■□□□□ 0.31
HDDC2-204ENST00000608295 IFIT3O14879 490 aaKnown RBP16.96■□□□□ 0.31
HDDC2-204ENST00000608295 CDC45O75419 566 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.31
HDDC2-204ENST00000608295 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
HDDC2-204ENST00000608295 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
HDDC2-204ENST00000608295 NECAB2Q7Z6G3 386 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 NCOA7Q8NI08 942 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 TINF2Q9BSI4 451 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 HTATIP2Q9BUP3 242 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
HDDC2-204ENST00000608295 H0YGN5 161 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 NFIBO00712 420 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 SLC27A2O14975 620 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 ICAM1P05362 532 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 ANTXR2P58335 489 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 SEC23AQ15436 765 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 FGD4Q96M96 766 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
HDDC2-204ENST00000608295 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 PFASO15067 1338 aa16.95■□□□□ 0.3
HDDC2-204ENST00000608295 DNAJC25-GNG10A0A024R161 153 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 PLA2G6O60733 806 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 IGHA2P01877 340 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 PARP1P09874 1014 aaKnown RBP16.94■□□□□ 0.3
HDDC2-204ENST00000608295 FDX1P10109 184 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 WTAPQ15007 396 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
HDDC2-204ENST00000608295 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 TMEM67Q5HYA8 995 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
HDDC2-204ENST00000608295 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 SLC30A10Q6XR72 485 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 RAB11FIP4Q86YS3 637 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 MYL10Q9BUA6 226 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
HDDC2-204ENST00000608295 CEP290O15078 2479 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ERICH2A1L162 156 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 SEPT4O43236 478 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 EVI5O60447 810 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ATN1P54259 1190 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 MB21D2Q8IYB1 491 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ANKLE1Q8NAG6 615 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 PIBF1Q8WXW3 757 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 BAZ2BQ9UIF8 2168 aaKnown RBP16.93■□□□□ 0.3
HDDC2-204ENST00000608295 ASTN1O14525 1302 aa16.93■□□□□ 0.3
HDDC2-204ENST00000608295 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
HDDC2-204ENST00000608295 PRC1O43663 620 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms