RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
ITGB5-211ENST00000608107 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 CRHR2Q13324 411 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 Q3C1V9 767 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 CPXCR1Q8N123 301 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 COA7Q96BR5 231 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 ORC3Q9UBD5 711 aaPredicted RBP11.89□□□□□ -0.51
ITGB5-211ENST00000608107 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
ITGB5-211ENST00000608107 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ADGRA2Q96PE1 1338 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ZBED4O75132 1171 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 FOSBP53539 338 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ANKRD13CQ8N6S4 541 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 PARK7Q99497 189 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 RNF26Q9BY78 433 aaPredicted RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ZCCHC17Q9NP64 241 aaKnown RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
ITGB5-211ENST00000608107 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
ITGB5-211ENST00000608107 MGAMO43451 1857 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 PNMA6FA0A0J9YX94 578 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 ZBTB5O15062 677 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 TRPA1O75762 1119 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
ITGB5-211ENST00000608107 TBC1D8O95759 1140 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 PLS1Q14651 629 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 PFKFB3Q16875 520 aaPredicted RBP11.87□□□□□ -0.51
ITGB5-211ENST00000608107 USH1GQ495M9 461 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 WWC2Q6AWC2 1192 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 SMCR8Q8TEV9 937 aaPredicted RBP11.87□□□□□ -0.51
ITGB5-211ENST00000608107 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
ITGB5-211ENST00000608107 RNF186Q9NXI6 227 aa11.87□□□□□ -0.51
ITGB5-211ENST00000608107 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 ADAMTS3O15072 1205 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 CA12O43570 354 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 CDKL5O76039 1030 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 ICAM1P05362 532 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 ALAS1P13196 640 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 SCG2P13521 617 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 GJB2P29033 226 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
ITGB5-211ENST00000608107 BECN1Q14457 450 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 HEATR3Q7Z4Q2 680 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
ITGB5-211ENST00000608107 TRIM22Q8IYM9 498 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 SEC63Q9UGP8 760 aaKnown RBP11.86□□□□□ -0.51
ITGB5-211ENST00000608107 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 SMC3Q9UQE7 1217 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 RABGAP1Q9Y3P9 1069 aa11.86□□□□□ -0.51
ITGB5-211ENST00000608107 CTDP1Q9Y5B0 961 aaPredicted RBP11.86□□□□□ -0.51
ITGB5-211ENST00000608107 STXBP3O00186 592 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 TLR2O60603 784 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 DEXIO95424 95 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 FDX1P10109 184 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 BCRP11274 1271 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 STAT3P40763 770 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 GCLCP48506 637 aaPredicted RBP11.85□□□□□ -0.51
ITGB5-211ENST00000608107 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 ERVK-24P63145 666 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 GUCY1B3Q02153 619 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
ITGB5-211ENST00000608107 MB21D1Q8N884 522 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 TBC1D5Q92609 795 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
ITGB5-211ENST00000608107 ALG1Q9BT22 464 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
ITGB5-211ENST00000608107 PORCNQ9H237 461 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 HOMER2Q9NSB8 354 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 MORF4L1Q9UBU8 362 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.85□□□□□ -0.51
ITGB5-211ENST00000608107 PCDHA1Q9Y5I3 950 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 LCTP09848 1927 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 PLXNB2O15031 1838 aa11.85□□□□□ -0.51
ITGB5-211ENST00000608107 RBBP6Q7Z6E9 1792 aaKnown RBP11.84□□□□□ -0.51
ITGB5-211ENST00000608107 NFIBO00712 420 aa11.84□□□□□ -0.51
ITGB5-211ENST00000608107 OPLAHO14841 1288 aa11.84□□□□□ -0.51
ITGB5-211ENST00000608107 ATP2A1O14983 1001 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms