RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 GMCL1Q96IK5 515 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 PAK6Q9NQU5 681 aaPredicted RBP11.77□□□□□ -0.53
CTSA-215ENST00000607187 FEM1BQ9UK73 627 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 NEDD4P46934 1319 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 SGSM2O43147 1006 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 PLA2G6O60733 806 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
CTSA-215ENST00000607187 MCCP23508 829 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 SLC1A4P43007 532 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 TRIM32Q13049 653 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 PTGDRQ13258 359 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 CCL14Q16627 93 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 RCSD1Q6JBY9 416 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 SKAP1Q86WV1 359 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
CTSA-215ENST00000607187 ESR2Q92731 530 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 SHISA4Q96DD7 197 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 TTC14Q96N46 770 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
CTSA-215ENST00000607187 RPTORQ8N122 1335 aa11.76□□□□□ -0.53
CTSA-215ENST00000607187 FRMPD3Q5JV73 1810 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 ATP2A1O14983 1001 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 SGPL1O95470 568 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 IGHA2P01877 340 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 TOP1P11387 765 aaKnown RBP11.75□□□□□ -0.53
CTSA-215ENST00000607187 CAPN2P17655 700 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 ADORA2AP29274 412 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 COPB2P35606 906 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 STAT2P52630 851 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 PTH1RQ03431 593 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 MCM6Q14566 821 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 NPLOC4Q8TAT6 608 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
CTSA-215ENST00000607187 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 DEFB118Q96PH6 123 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 TMEM47Q9BQJ4 181 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
CTSA-215ENST00000607187 TEX13BQ9BXU2 312 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTSA-215ENST00000607187 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 HMX1Q9NP08 348 aaPredicted RBP11.75□□□□□ -0.53
CTSA-215ENST00000607187 FLRT1Q9NZU1 646 aa11.75□□□□□ -0.53
CTSA-215ENST00000607187 B4E1Z4 1266 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 COBLO75128 1261 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 ZBED4O75132 1171 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 KDM4AO75164 1064 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 FDX1P10109 184 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 FCER1AP12319 257 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 CACNB2Q08289 660 aaPredicted RBP11.74□□□□□ -0.53
CTSA-215ENST00000607187 BMP2KLQ5H9B9 411 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 SNRNP48Q6IEG0 339 aaKnown RBP11.74□□□□□ -0.53
CTSA-215ENST00000607187 KCTD1Q719H9 257 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 DPP9Q86TI2 863 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 OXER1Q8TDS5 423 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 DCAF4Q8WV16 495 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 ZSWIM5Q9P217 1185 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 RIPK3Q9Y572 518 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 MCM3APO60318 1980 aa11.74□□□□□ -0.53
CTSA-215ENST00000607187 MYH6P13533 1939 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 OAZ1P54368 228 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 CCDC178Q5BJE1 867 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 OLFML2BQ68BL8 750 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 UBE2Q1Q7Z7E8 422 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 CPXCR1Q8N123 301 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 MMP19Q99542 508 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 ZKSCAN3Q9BRR0 538 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 KRT23Q9C075 422 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 CNNM2Q9H8M5 875 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 SLC5A4Q9NY91 659 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
CTSA-215ENST00000607187 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
CTSA-215ENST00000607187 ZNF536O15090 1300 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 NEFLP07196 543 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 CYP21A2P08686 494 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 PDHBP11177 359 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
CTSA-215ENST00000607187 IKQ13123 557 aaPredicted RBP11.72□□□□□ -0.53
CTSA-215ENST00000607187 MFSD14CQ5VZR4 134 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 BTNL9Q6UXG8 535 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 MAP4K1Q92918 833 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
CTSA-215ENST00000607187 RAVER2Q9HCJ3 691 aaKnown RBP11.72□□□□□ -0.53
CTSA-215ENST00000607187 PRR12Q9ULL5 1215 aa11.72□□□□□ -0.53
CTSA-215ENST00000607187 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
CTSA-215ENST00000607187 MTMR7Q9Y216 660 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms